Gb_16513

Description : transcription factor (WRKY)

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000087 (LandPlants) Phylogenetic Tree(s): OG_05_0000087_tree ,
OG_06_0000067 (SeedPlants) Phylogenetic Tree(s): OG_06_0000067_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_16513
Cluster	HCCA: Cluster_325

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00015p00181570	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
AT1G30650	WRKY14, AR411, ATWRKY14	WRKY DNA-binding protein 14	0.04	Archaeplastida
AT2G03340	WRKY3	WRKY DNA-binding protein 3	0.02	Archaeplastida
AT2G04880	WRKY1, ZAP1, ATWRKY1	zinc-dependent activator protein-1	0.02	Archaeplastida
AT2G44745	No alias	WRKY family transcription factor	0.05	Archaeplastida
AT3G58710	ATWRKY69, WRKY69	WRKY DNA-binding protein 69	0.04	Archaeplastida
AT4G39410	ATWRKY13, WRKY13	WRKY DNA-binding protein 13	0.06	Archaeplastida
AT5G46350	WRKY8, ATWRKY8	WRKY DNA-binding protein 8	0.03	Archaeplastida
GSVIVT01018300001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01021765001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01022259001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.05	Archaeplastida
GSVIVT01026969001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01036223001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.05	Archaeplastida
Gb_05026	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os01g18584.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os01g43650.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g46800.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os01g53040.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os02g47060.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os03g45450.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os05g04640.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os05g40080.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os06g44010.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os07g02060.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os07g48260.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os08g29660.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os10g42850.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os11g02540.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_11351g0010	No alias	transcription factor (WRKY). serine carboxypeptidase	0.04	Archaeplastida
MA_136551g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_306130g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_74833g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_91468g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Mp6g16800.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Mp8g10640.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Pp3c13_15520V3.1	No alias	WRKY family transcription factor	0.02	Archaeplastida
Pp3c14_17020V3.1	No alias	WRKY DNA-binding protein 7	0.02	Archaeplastida
Pp3c1_40230V3.1	No alias	WRKY DNA-binding protein 11	0.03	Archaeplastida
Pp3c3_21440V3.1	No alias	WRKY family transcription factor	0.03	Archaeplastida
Solyc01g089960.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc02g072190.4.1	No alias	No annotation	0.04	Archaeplastida
Solyc03g007380.2.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc10g005680.2.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc12g056745.1.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e002502_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e005078_P002	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e007834_P002	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e012066_P002	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e020279_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e021431_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e023139_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e024352_P003	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e027804_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e027989_P001	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Zm00001e029049_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e031159_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e034150_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e035385_P002	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e035859_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e036514_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e037631_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e038239_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e041561_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0017016	Ras GTPase binding	IEP	Neighborhood
MF	GO:0017048	Rho GTPase binding	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0031267	small GTPase binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
MF	GO:0051020	GTPase binding	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR018872	Zn-cluster-dom	241	286
IPR003657	WRKY_dom	290	346

External Links

No external refs found!

Gb_16513

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation