Gb_17066

Description : component RPS14 of SSU proteome

Gene families : OG0002067 (Archaeplastida) Phylogenetic Tree(s): OG0002067_tree ,
OG_05_0002738 (LandPlants) Phylogenetic Tree(s): OG_05_0002738_tree ,
OG_06_0002374 (SeedPlants) Phylogenetic Tree(s): OG_06_0002374_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_17066
Cluster	HCCA: Cluster_323

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00104960	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.small subunit...	0.12	Archaeplastida
AT2G36160	No alias	Ribosomal protein S11 family protein	0.17	Archaeplastida
AT3G11510	No alias	Ribosomal protein S11 family protein	0.12	Archaeplastida
AT3G52580	No alias	Ribosomal protein S11 family protein	0.16	Archaeplastida
Cpa\|evm.model.tig00001154.44	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.13	Archaeplastida
GSVIVT01033877001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.12	Archaeplastida
GSVIVT01036096001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.14	Archaeplastida
LOC_Os02g06700.1	No alias	component RPS14 of SSU proteome	0.06	Archaeplastida
LOC_Os02g33140.1	No alias	component RPS14 of SSU proteome	0.13	Archaeplastida
MA_113075g0010	No alias	component RPS14 of SSU proteome	0.05	Archaeplastida
Mp8g03250.1	No alias	component RPS14 of SSU proteome	0.15	Archaeplastida
Mp8g10900.1	No alias	component RPS14 of SSU proteome	0.16	Archaeplastida
Pp3c15_22240V3.1	No alias	Ribosomal protein S11 family protein	0.16	Archaeplastida
Pp3c9_21480V3.1	No alias	Ribosomal protein S11 family protein	0.1	Archaeplastida
Smo183051	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.08	Archaeplastida
Solyc09g010100.3.1	No alias	component RPS14 of SSU proteome	0.15	Archaeplastida
Solyc10g083280.4.1	No alias	component RPS14 of SSU proteome	0.12	Archaeplastida
Zm00001e022659_P002	No alias	component RPS14 of SSU proteome	0.1	Archaeplastida
Zm00001e030302_P001	No alias	component RPS14 of SSU proteome	0.15	Archaeplastida
Zm00001e030303_P001	No alias	component RPS14 of SSU proteome	0.15	Archaeplastida
Zm00001e037468_P002	No alias	component RPS14 of SSU proteome	0.17	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003746	translation elongation factor activity	IEP	Neighborhood
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Neighborhood
MF	GO:0005048	signal sequence binding	IEP	Neighborhood
CC	GO:0005786	signal recognition particle, endoplasmic reticulum targeting	IEP	Neighborhood
CC	GO:0005787	signal peptidase complex	IEP	Neighborhood
BP	GO:0006414	translational elongation	IEP	Neighborhood
BP	GO:0006465	signal peptide processing	IEP	Neighborhood
BP	GO:0006605	protein targeting	IEP	Neighborhood
BP	GO:0006612	protein targeting to membrane	IEP	Neighborhood
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	Neighborhood
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	Neighborhood
MF	GO:0008135	translation factor activity, RNA binding	IEP	Neighborhood
MF	GO:0008312	7S RNA binding	IEP	Neighborhood
CC	GO:0015934	large ribosomal subunit	IEP	Neighborhood
BP	GO:0016485	protein processing	IEP	Neighborhood
MF	GO:0016859	cis-trans isomerase activity	IEP	Neighborhood
BP	GO:0018208	peptidyl-proline modification	IEP	Neighborhood
MF	GO:0030942	endoplasmic reticulum signal peptide binding	IEP	Neighborhood
MF	GO:0033218	amide binding	IEP	Neighborhood
BP	GO:0033365	protein localization to organelle	IEP	Neighborhood
BP	GO:0034613	cellular protein localization	IEP	Neighborhood
MF	GO:0042277	peptide binding	IEP	Neighborhood
CC	GO:0044391	ribosomal subunit	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044432	endoplasmic reticulum part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
BP	GO:0045047	protein targeting to ER	IEP	Neighborhood
CC	GO:0048500	signal recognition particle	IEP	Neighborhood
BP	GO:0051604	protein maturation	IEP	Neighborhood
BP	GO:0070727	cellular macromolecule localization	IEP	Neighborhood
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	Neighborhood
BP	GO:0072594	establishment of protein localization to organelle	IEP	Neighborhood
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	Neighborhood
BP	GO:0072657	protein localization to membrane	IEP	Neighborhood
BP	GO:0090150	establishment of protein localization to membrane	IEP	Neighborhood
CC	GO:1905368	peptidase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001971	Ribosomal_S11	29	147

External Links

No external refs found!

Gb_17066

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation