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  5. Gb_17471

Gb_17471


Description : aminoacyl-tRNA binding factor (eEF1A)


Gene families : OG0000191 (Archaeplastida) Phylogenetic Tree(s): OG0000191_tree ,
OG_05_0000317 (LandPlants) Phylogenetic Tree(s): OG_05_0000317_tree ,
OG_06_0000423 (SeedPlants) Phylogenetic Tree(s): OG_06_0000423_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_17471
Cluster HCCA: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
AT5G60390 No alias GTP binding Elongation factor Tu family protein 0.03 Archaeplastida
Cpa|evm.model.tig00021352.57 No alias Protein biosynthesis.translation elongation.eEF1A... 0.02 Archaeplastida
Cre06.g284750 No alias Protein biosynthesis.translation termination.eRF3... 0.02 Archaeplastida
LOC_Os03g08010.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.05 Archaeplastida
LOC_Os03g08020.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.04 Archaeplastida
LOC_Os03g08050.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.04 Archaeplastida
Pp3c27_2160V3.1 No alias Translation elongation factor EF1A/initiation factor... 0.02 Archaeplastida
Pp3c2_6770V3.1 No alias GTP binding Elongation factor Tu family protein 0.02 Archaeplastida
Smo169717 No alias Protein biosynthesis.translation elongation.eEF1A... 0.03 Archaeplastida
Solyc11g069097.1.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.03 Archaeplastida
Zm00001e026762_P001 No alias aminoacyl-tRNA binding factor (eEF1A) 0.03 Archaeplastida
Zm00001e026763_P003 No alias aminoacyl-tRNA binding factor (eEF1A) 0.04 Archaeplastida
Zm00001e031390_P004 No alias aminoacyl-tRNA binding factor (eEF1A) 0.04 Archaeplastida
Zm00001e031391_P002 No alias aminoacyl-tRNA binding factor (eEF1A) 0.03 Archaeplastida
Zm00001e040640_P002 No alias eRF3 peptide release factor 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0005047 signal recognition particle binding IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018196 peptidyl-asparagine modification IEP Neighborhood
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Neighborhood
BP GO:0030490 maturation of SSU-rRNA IEP Neighborhood
MF GO:0030515 snoRNA binding IEP Neighborhood
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
MF GO:0043021 ribonucleoprotein complex binding IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 248 313
IPR004160 Transl_elong_EFTu/EF1A_C 322 429
IPR000795 TF_GTP-bd_dom 5 222
No external refs found!