Gb_19970

Description : S-adenosyl methionine decarboxylase

Gene families : OG0001075 (Archaeplastida) Phylogenetic Tree(s): OG0001075_tree ,
OG_05_0000749 (LandPlants) Phylogenetic Tree(s): OG_05_0000749_tree ,
OG_06_0000673 (SeedPlants) Phylogenetic Tree(s): OG_06_0000673_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_19970
Cluster	HCCA: Cluster_325

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os02g39795.1	No alias	S-adenosyl methionine decarboxylase	0.03	Archaeplastida
LOC_Os04g42090.3	No alias	S-adenosyl methionine decarboxylase	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEA	Interproscan
BP	GO:0006576	cellular biogenic amine metabolic process	None	Extended
BP	GO:0006595	polyamine metabolic process	None	Extended
BP	GO:0006596	polyamine biosynthetic process	None	Extended
BP	GO:0006597	spermine biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008215	spermine metabolic process	None	Extended
BP	GO:0008216	spermidine metabolic process	None	Extended
BP	GO:0008295	spermidine biosynthetic process	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0009309	amine biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0017144	drug metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042401	cellular biogenic amine biosynthetic process	None	Extended
BP	GO:0044106	cellular amine metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0097164	ammonium ion metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005384	manganese ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006873	cellular ion homeostasis	IEP	Neighborhood
BP	GO:0006875	cellular metal ion homeostasis	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
BP	GO:0019725	cellular homeostasis	IEP	Neighborhood
BP	GO:0030003	cellular cation homeostasis	IEP	Neighborhood
BP	GO:0030026	cellular manganese ion homeostasis	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0042592	homeostatic process	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
MF	GO:0043531	ADP binding	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	Neighborhood
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Neighborhood
BP	GO:0048878	chemical homeostasis	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0050801	ion homeostasis	IEP	Neighborhood
BP	GO:0055065	metal ion homeostasis	IEP	Neighborhood
BP	GO:0055071	manganese ion homeostasis	IEP	Neighborhood
BP	GO:0055076	transition metal ion homeostasis	IEP	Neighborhood
BP	GO:0055080	cation homeostasis	IEP	Neighborhood
BP	GO:0055082	cellular chemical homeostasis	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
BP	GO:0098771	inorganic ion homeostasis	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001985	S-AdoMet_decarboxylase	16	350

External Links

No external refs found!

Gb_19970

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation