Coexpression cluster: Cluster_158 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005849 mRNA cleavage factor complex 3.17% (2/63) 9.46 3e-06 0.000183
GO:0006378 mRNA polyadenylation 3.17% (2/63) 9.46 3e-06 0.000183
GO:0031124 mRNA 3'-end processing 3.17% (2/63) 9.05 5e-06 0.000244
GO:0031123 RNA 3'-end processing 3.17% (2/63) 8.46 1.3e-05 0.000366
GO:0003729 mRNA binding 3.17% (2/63) 8.46 1.3e-05 0.000366
GO:0016769 transferase activity, transferring nitrogenous groups 3.17% (2/63) 7.35 6.8e-05 0.001184
GO:0008483 transaminase activity 3.17% (2/63) 7.35 6.8e-05 0.001184
GO:0043631 RNA polyadenylation 3.17% (2/63) 7.46 5.8e-05 0.001337
GO:0006397 mRNA processing 3.17% (2/63) 5.62 0.000775 0.01077
GO:0044451 nucleoplasm part 3.17% (2/63) 5.69 0.000704 0.01088
GO:0016071 mRNA metabolic process 3.17% (2/63) 5.4 0.001047 0.013226
GO:0044428 nuclear part 3.17% (2/63) 4.29 0.004766 0.031545
GO:0009581 detection of external stimulus 1.59% (1/63) 7.72 0.004719 0.032795
GO:0009582 detection of abiotic stimulus 1.59% (1/63) 7.72 0.004719 0.032795
GO:0009583 detection of light stimulus 1.59% (1/63) 7.72 0.004719 0.032795
GO:0009584 detection of visible light 1.59% (1/63) 7.72 0.004719 0.032795
GO:0051606 detection of stimulus 1.59% (1/63) 7.72 0.004719 0.032795
GO:0018298 protein-chromophore linkage 1.59% (1/63) 7.72 0.004719 0.032795
GO:0009314 response to radiation 1.59% (1/63) 7.46 0.00566 0.034205
GO:0009416 response to light stimulus 1.59% (1/63) 7.46 0.00566 0.034205
GO:0019842 vitamin binding 3.17% (2/63) 4.05 0.006623 0.038361
GO:0006396 RNA processing 3.17% (2/63) 3.93 0.007764 0.043167
GO:0031072 heat shock protein binding 1.59% (1/63) 8.05 0.003777 0.043747
GO:0030170 pyridoxal phosphate binding 3.17% (2/63) 4.31 0.00468 0.04647
GO:0070279 vitamin B6 binding 3.17% (2/63) 4.31 0.00468 0.04647
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_22 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_79 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_262 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_192 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_236 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_240 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_259 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_142 0.026 Archaeplastida Compare
Gingko biloba HCCA Cluster_144 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_206 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_209 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_296 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_336 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_108 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_270 0.03 Archaeplastida Compare
Zea mays HCCA Cluster_283 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_326 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_342 0.045 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_155 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_12 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_42 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_255 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_286 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_150 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_370 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_438 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_494 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_6 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_163 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_170 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_176 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_206 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_211 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_271 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_348 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_354 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_360 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_190 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_81 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_177 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_212 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_115 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_142 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_145 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_189 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_200 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_235 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_239 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_163 0.02 Archaeplastida Compare
Sequences (63) (download table)

InterPro Domains

GO Terms

Family Terms