Coexpression cluster: Cluster_48 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0042256 mature ribosome assembly 3.75% (3/80) 7.83 0.0 4.2e-05
GO:0042255 ribosome assembly 3.75% (3/80) 7.83 0.0 4.2e-05
GO:0043022 ribosome binding 3.75% (3/80) 7.48 1e-06 6.1e-05
GO:0043021 ribonucleoprotein complex binding 3.75% (3/80) 7.12 1e-06 8.2e-05
GO:0070925 organelle assembly 3.75% (3/80) 7.2 1e-06 8.5e-05
GO:0044877 protein-containing complex binding 3.75% (3/80) 6.83 3e-06 0.000128
GO:0022618 ribonucleoprotein complex assembly 3.75% (3/80) 5.16 8.6e-05 0.002908
GO:0071826 ribonucleoprotein complex subunit organization 3.75% (3/80) 5.16 8.6e-05 0.002908
GO:0006996 organelle organization 3.75% (3/80) 5.22 7.6e-05 0.00328
GO:0003674 molecular_function 43.75% (35/80) 0.84 0.000115 0.003487
GO:0004602 glutathione peroxidase activity 2.5% (2/80) 6.7 0.000169 0.00428
GO:0016832 aldehyde-lyase activity 2.5% (2/80) 6.7 0.000169 0.00428
GO:0016829 lyase activity 5.0% (4/80) 3.52 0.000429 0.010021
GO:0005975 carbohydrate metabolic process 7.5% (6/80) 2.56 0.000564 0.012251
GO:0034622 cellular protein-containing complex assembly 3.75% (3/80) 4.14 0.00069 0.013992
GO:0065003 protein-containing complex assembly 3.75% (3/80) 4.04 0.000841 0.015973
GO:0022607 cellular component assembly 3.75% (3/80) 3.89 0.001122 0.018944
GO:0043933 protein-containing complex subunit organization 3.75% (3/80) 3.92 0.001065 0.019046
GO:0044249 cellular biosynthetic process 7.5% (6/80) 2.3 0.001407 0.02251
GO:0005488 binding 27.5% (22/80) 0.93 0.001763 0.026795
GO:1901576 organic substance biosynthetic process 7.5% (6/80) 2.2 0.001978 0.028627
GO:0030244 cellulose biosynthetic process 2.5% (2/80) 4.68 0.002819 0.034281
GO:0030243 cellulose metabolic process 2.5% (2/80) 4.68 0.002819 0.034281
GO:0016760 cellulose synthase (UDP-forming) activity 2.5% (2/80) 4.68 0.002819 0.034281
GO:0016759 cellulose synthase activity 2.5% (2/80) 4.68 0.002819 0.034281
GO:0034645 cellular macromolecule biosynthetic process 5.0% (4/80) 2.75 0.003027 0.035394
GO:0009058 biosynthetic process 7.5% (6/80) 2.06 0.003201 0.036042
GO:0016758 transferase activity, transferring hexosyl groups 3.75% (3/80) 3.33 0.003388 0.036787
GO:0009059 macromolecule biosynthetic process 5.0% (4/80) 2.65 0.003912 0.041009
GO:0008150 biological_process 27.5% (22/80) 0.83 0.004117 0.041715
GO:0000271 polysaccharide biosynthetic process 2.5% (2/80) 4.26 0.004985 0.043295
GO:0009250 glucan biosynthetic process 2.5% (2/80) 4.26 0.004985 0.043295
GO:0051273 beta-glucan metabolic process 2.5% (2/80) 4.26 0.004985 0.043295
GO:0033692 cellular polysaccharide biosynthetic process 2.5% (2/80) 4.26 0.004985 0.043295
GO:0051274 beta-glucan biosynthetic process 2.5% (2/80) 4.26 0.004985 0.043295
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_19 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_93 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_238 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_180 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_219 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_335 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_11 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_117 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_120 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_237 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_24 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_71 0.047 Archaeplastida Compare
Picea abies HCCA Cluster_172 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_223 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_250 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_265 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_274 0.031 Archaeplastida Compare
Picea abies HCCA Cluster_305 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_312 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_354 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_522 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_143 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_161 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_163 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_195 0.024 Archaeplastida Compare
Sequences (80) (download table)

InterPro Domains

GO Terms

Family Terms