Coexpression cluster: Cluster_192 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0051168 nuclear export 13.7% (10/73) 5.74 0.0 0.0
GO:0051169 nuclear transport 15.07% (11/73) 4.82 0.0 0.0
GO:0006913 nucleocytoplasmic transport 15.07% (11/73) 4.82 0.0 0.0
GO:0051028 mRNA transport 12.33% (9/73) 5.8 0.0 0.0
GO:0006406 mRNA export from nucleus 12.33% (9/73) 5.8 0.0 0.0
GO:0050658 RNA transport 12.33% (9/73) 5.65 0.0 0.0
GO:0006405 RNA export from nucleus 12.33% (9/73) 5.65 0.0 0.0
GO:0051236 establishment of RNA localization 12.33% (9/73) 5.65 0.0 0.0
GO:0050657 nucleic acid transport 12.33% (9/73) 5.65 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 42.47% (31/73) 2.16 0.0 0.0
GO:0090304 nucleic acid metabolic process 36.99% (27/73) 2.35 0.0 0.0
GO:0015931 nucleobase-containing compound transport 13.7% (10/73) 4.92 0.0 0.0
GO:0140098 catalytic activity, acting on RNA 16.44% (12/73) 4.26 0.0 0.0
GO:0046483 heterocycle metabolic process 42.47% (31/73) 1.96 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 42.47% (31/73) 1.87 0.0 0.0
GO:0043170 macromolecule metabolic process 50.68% (37/73) 1.57 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 42.47% (31/73) 1.82 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 42.47% (31/73) 1.75 0.0 0.0
GO:0016070 RNA metabolic process 27.4% (20/73) 2.45 0.0 0.0
GO:0006807 nitrogen compound metabolic process 50.68% (37/73) 1.39 0.0 0.0
GO:0006606 protein import into nucleus 9.59% (7/73) 4.79 0.0 0.0
GO:0034504 protein localization to nucleus 9.59% (7/73) 4.76 0.0 0.0
GO:0051170 import into nucleus 9.59% (7/73) 4.74 0.0 0.0
GO:0044238 primary metabolic process 53.42% (39/73) 1.19 0.0 1e-06
GO:0032501 multicellular organismal process 27.4% (20/73) 2.04 0.0 1e-06
GO:0005829 cytosol 24.66% (18/73) 2.19 0.0 2e-06
GO:0007275 multicellular organism development 19.18% (14/73) 2.6 0.0 2e-06
GO:0016043 cellular component organization 32.88% (24/73) 1.71 0.0 3e-06
GO:0009790 embryo development 15.07% (11/73) 2.98 0.0 4e-06
GO:0009793 embryo development ending in seed dormancy 15.07% (11/73) 2.98 0.0 4e-06
GO:0048856 anatomical structure development 26.03% (19/73) 1.99 0.0 5e-06
GO:0022414 reproductive process 28.77% (21/73) 1.83 0.0 5e-06
GO:0009933 meristem structural organization 8.22% (6/73) 4.58 0.0 6e-06
GO:0050826 response to freezing 8.22% (6/73) 4.57 0.0 6e-06
GO:0003006 developmental process involved in reproduction 26.03% (19/73) 1.95 0.0 6e-06
GO:0048532 anatomical structure arrangement 8.22% (6/73) 4.49 0.0 7e-06
GO:0019915 lipid storage 8.22% (6/73) 4.48 0.0 8e-06
GO:0071840 cellular component organization or biogenesis 32.88% (24/73) 1.6 0.0 9e-06
GO:0009909 regulation of flower development 12.33% (9/73) 3.25 0.0 1.1e-05
GO:0009756 carbohydrate mediated signaling 8.22% (6/73) 4.32 1e-06 1.3e-05
GO:0010182 sugar mediated signaling pathway 8.22% (6/73) 4.32 1e-06 1.3e-05
GO:0051235 maintenance of location 8.22% (6/73) 4.3 1e-06 1.3e-05
GO:0048580 regulation of post-embryonic development 13.7% (10/73) 2.97 1e-06 1.4e-05
GO:0044260 cellular macromolecule metabolic process 35.62% (26/73) 1.44 1e-06 1.8e-05
GO:0006396 RNA processing 16.44% (12/73) 2.54 1e-06 1.9e-05
GO:0048831 regulation of shoot system development 12.33% (9/73) 3.11 1e-06 1.9e-05
GO:0071704 organic substance metabolic process 53.42% (39/73) 1.01 1e-06 2e-05
GO:0010228 vegetative to reproductive phase transition of meristem 10.96% (8/73) 3.35 1e-06 2.4e-05
GO:0032502 developmental process 34.25% (25/73) 1.45 1e-06 2.7e-05
GO:0017038 protein import 9.59% (7/73) 3.64 1e-06 2.8e-05
GO:2000026 regulation of multicellular organismal development 13.7% (10/73) 2.79 2e-06 3e-05
GO:0022402 cell cycle process 13.7% (10/73) 2.8 2e-06 3e-05
GO:2000241 regulation of reproductive process 12.33% (9/73) 2.99 2e-06 3.3e-05
GO:0007062 sister chromatid cohesion 8.22% (6/73) 4.01 2e-06 3.5e-05
GO:0048609 multicellular organismal reproductive process 9.59% (7/73) 3.54 2e-06 4.1e-05
GO:0051239 regulation of multicellular organismal process 13.7% (10/73) 2.73 3e-06 4.3e-05
GO:0008152 metabolic process 54.79% (40/73) 0.93 3e-06 4.7e-05
GO:0009987 cellular process 61.64% (45/73) 0.82 3e-06 4.9e-05
GO:0007389 pattern specification process 10.96% (8/73) 3.16 3e-06 5e-05
GO:0010162 seed dormancy process 8.22% (6/73) 3.86 4e-06 5.9e-05
GO:0022611 dormancy process 8.22% (6/73) 3.85 4e-06 6e-05
GO:0006259 DNA metabolic process 15.07% (11/73) 2.48 4e-06 6.1e-05
GO:0010431 seed maturation 5.48% (4/73) 5.14 5e-06 7.6e-05
GO:0009845 seed germination 8.22% (6/73) 3.77 5e-06 7.9e-05
GO:0010072 primary shoot apical meristem specification 5.48% (4/73) 5.11 6e-06 8e-05
GO:0009880 embryonic pattern specification 5.48% (4/73) 5.04 7e-06 9.5e-05
GO:0034654 nucleobase-containing compound biosynthetic process 15.07% (11/73) 2.39 7e-06 9.9e-05
GO:0009639 response to red or far red light 10.96% (8/73) 2.97 8e-06 0.000114
GO:0005635 nuclear envelope 5.48% (4/73) 4.92 9e-06 0.000125
GO:0090421 embryonic meristem initiation 5.48% (4/73) 4.92 9e-06 0.000125
GO:0044237 cellular metabolic process 49.32% (36/73) 0.95 1.1e-05 0.000144
GO:0016567 protein ubiquitination 8.22% (6/73) 3.57 1.2e-05 0.000155
GO:0005488 binding 43.84% (32/73) 1.04 1.3e-05 0.000171
GO:0046907 intracellular transport 16.44% (12/73) 2.14 1.5e-05 0.000189
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 5.48% (4/73) 4.73 1.6e-05 0.000197
GO:0005643 nuclear pore 4.11% (3/73) 5.9 1.7e-05 0.000204
GO:0050793 regulation of developmental process 15.07% (11/73) 2.25 1.8e-05 0.000217
GO:0009640 photomorphogenesis 8.22% (6/73) 3.44 2e-05 0.000238
GO:0032446 protein modification by small protein conjugation 8.22% (6/73) 3.43 2e-05 0.000241
GO:0009791 post-embryonic development 12.33% (9/73) 2.56 2.1e-05 0.000247
GO:0034062 5'-3' RNA polymerase activity 5.48% (4/73) 4.59 2.4e-05 0.000269
GO:0097747 RNA polymerase activity 5.48% (4/73) 4.59 2.4e-05 0.000269
GO:0051276 chromosome organization 8.22% (6/73) 3.31 3.2e-05 0.000364
GO:0044424 intracellular part 90.41% (66/73) 0.36 3.3e-05 0.000364
GO:0051649 establishment of localization in cell 16.44% (12/73) 2.02 3.4e-05 0.000369
GO:0010564 regulation of cell cycle process 6.85% (5/73) 3.77 3.4e-05 0.00037
GO:0004386 helicase activity 6.85% (5/73) 3.77 3.4e-05 0.00037
GO:0016779 nucleotidyltransferase activity 6.85% (5/73) 3.74 3.8e-05 0.0004
GO:0051128 regulation of cellular component organization 9.59% (7/73) 2.88 4.6e-05 0.00048
GO:0048825 cotyledon development 5.48% (4/73) 4.34 4.7e-05 0.000489
GO:0018130 heterocycle biosynthetic process 16.44% (12/73) 1.97 4.8e-05 0.000496
GO:1901363 heterocyclic compound binding 27.4% (20/73) 1.37 5e-05 0.000508
GO:0045595 regulation of cell differentiation 5.48% (4/73) 4.3 5.2e-05 0.000519
GO:0010638 positive regulation of organelle organization 6.85% (5/73) 3.64 5.2e-05 0.000524
GO:0051130 positive regulation of cellular component organization 6.85% (5/73) 3.63 5.4e-05 0.000529
GO:0033043 regulation of organelle organization 8.22% (6/73) 3.17 5.5e-05 0.00053
GO:0097159 organic cyclic compound binding 27.4% (20/73) 1.36 5.5e-05 0.000533
GO:0005634 nucleus 56.16% (41/73) 0.74 5.8e-05 0.000555
GO:0032259 methylation 10.96% (8/73) 2.56 6.2e-05 0.000579
GO:0043414 macromolecule methylation 10.96% (8/73) 2.56 6.2e-05 0.000579
GO:0044271 cellular nitrogen compound biosynthetic process 17.81% (13/73) 1.81 7.2e-05 0.000665
GO:0006325 chromatin organization 10.96% (8/73) 2.52 7.6e-05 0.000693
GO:0051641 cellular localization 16.44% (12/73) 1.89 8.2e-05 0.000744
GO:0016569 covalent chromatin modification 9.59% (7/73) 2.73 8.9e-05 0.000788
GO:0048366 leaf development 6.85% (5/73) 3.48 8.9e-05 0.000795
GO:0010014 meristem initiation 6.85% (5/73) 3.47 9.1e-05 0.000802
GO:0022610 biological adhesion 5.48% (4/73) 4.07 9.6e-05 0.000831
GO:0007155 cell adhesion 5.48% (4/73) 4.07 9.6e-05 0.000831
GO:0071695 anatomical structure maturation 6.85% (5/73) 3.38 0.000122 0.001046
GO:0051726 regulation of cell cycle 8.22% (6/73) 2.96 0.000124 0.00105
GO:0070647 protein modification by small protein conjugation or removal 8.22% (6/73) 2.94 0.000133 0.001121
GO:0044428 nuclear part 10.96% (8/73) 2.39 0.00014 0.001154
GO:0051301 cell division 5.48% (4/73) 3.94 0.000139 0.001159
GO:0045010 actin nucleation 5.48% (4/73) 3.91 0.00015 0.00123
GO:0030838 positive regulation of actin filament polymerization 5.48% (4/73) 3.88 0.000162 0.001315
GO:0021700 developmental maturation 6.85% (5/73) 3.29 0.000165 0.001324
GO:0032273 positive regulation of protein polymerization 5.48% (4/73) 3.86 0.000168 0.001342
GO:0031334 positive regulation of protein complex assembly 5.48% (4/73) 3.85 0.000175 0.001381
GO:0044089 positive regulation of cellular component biogenesis 5.48% (4/73) 3.84 0.000181 0.001396
GO:0051495 positive regulation of cytoskeleton organization 5.48% (4/73) 3.84 0.000181 0.001396
GO:1902905 positive regulation of supramolecular fiber organization 5.48% (4/73) 3.84 0.000181 0.001396
GO:0008064 regulation of actin polymerization or depolymerization 5.48% (4/73) 3.78 0.000209 0.001534
GO:0110053 regulation of actin filament organization 5.48% (4/73) 3.78 0.000209 0.001534
GO:0032956 regulation of actin cytoskeleton organization 5.48% (4/73) 3.78 0.000209 0.001534
GO:0030832 regulation of actin filament length 5.48% (4/73) 3.78 0.000209 0.001534
GO:0032970 regulation of actin filament-based process 5.48% (4/73) 3.78 0.000209 0.001534
GO:0030833 regulation of actin filament polymerization 5.48% (4/73) 3.8 0.000202 0.001542
GO:0032271 regulation of protein polymerization 5.48% (4/73) 3.76 0.000224 0.001631
GO:0043254 regulation of protein complex assembly 5.48% (4/73) 3.75 0.000231 0.001674
GO:0072594 establishment of protein localization to organelle 9.59% (7/73) 2.51 0.000233 0.001675
GO:0033365 protein localization to organelle 9.59% (7/73) 2.5 0.000243 0.001728
GO:0043412 macromolecule modification 20.55% (15/73) 1.48 0.000246 0.001736
GO:1902903 regulation of supramolecular fiber organization 5.48% (4/73) 3.72 0.000248 0.001737
GO:0051493 regulation of cytoskeleton organization 5.48% (4/73) 3.7 0.000264 0.001775
GO:0016875 ligase activity, forming carbon-oxygen bonds 4.11% (3/73) 4.6 0.000263 0.00178
GO:0004812 aminoacyl-tRNA ligase activity 4.11% (3/73) 4.6 0.000263 0.00178
GO:0043039 tRNA aminoacylation 4.11% (3/73) 4.6 0.000263 0.00178
GO:0043038 amino acid activation 4.11% (3/73) 4.6 0.000263 0.00178
GO:0006418 tRNA aminoacylation for protein translation 4.11% (3/73) 4.6 0.000263 0.00178
GO:0007049 cell cycle 6.85% (5/73) 3.11 0.000289 0.001923
GO:0031047 gene silencing by RNA 6.85% (5/73) 3.07 0.000333 0.002206
GO:1901265 nucleoside phosphate binding 12.33% (9/73) 2.01 0.000372 0.002413
GO:0000166 nucleotide binding 12.33% (9/73) 2.01 0.000372 0.002413
GO:0035196 production of miRNAs involved in gene silencing by miRNA 5.48% (4/73) 3.57 0.000372 0.002446
GO:0044087 regulation of cellular component biogenesis 5.48% (4/73) 3.55 0.000383 0.002467
GO:0016579 protein deubiquitination 4.11% (3/73) 4.4 0.000397 0.002505
GO:0009314 response to radiation 15.07% (11/73) 1.75 0.000395 0.00251
GO:0010090 trichome morphogenesis 5.48% (4/73) 3.54 0.000395 0.002523
GO:0006342 chromatin silencing 6.85% (5/73) 3.0 0.000406 0.002545
GO:0003723 RNA binding 9.59% (7/73) 2.37 0.000416 0.002586
GO:0045814 negative regulation of gene expression, epigenetic 6.85% (5/73) 2.99 0.00043 0.00266
GO:0010074 maintenance of meristem identity 4.11% (3/73) 4.34 0.000442 0.002715
GO:0002376 immune system process 10.96% (8/73) 2.13 0.000483 0.002946
GO:0034645 cellular macromolecule biosynthetic process 15.07% (11/73) 1.7 0.000509 0.003086
GO:0006996 organelle organization 15.07% (11/73) 1.7 0.000516 0.003106
GO:0030422 production of siRNA involved in RNA interference 5.48% (4/73) 3.44 0.000522 0.003124
GO:1903507 negative regulation of nucleic acid-templated transcription 8.22% (6/73) 2.57 0.000536 0.003145
GO:0045892 negative regulation of transcription, DNA-templated 8.22% (6/73) 2.57 0.000536 0.003145
GO:1902679 negative regulation of RNA biosynthetic process 8.22% (6/73) 2.57 0.000536 0.003145
GO:0070918 production of small RNA involved in gene silencing by RNA 5.48% (4/73) 3.41 0.000566 0.003278
GO:0031050 dsRNA fragmentation 5.48% (4/73) 3.41 0.000566 0.003278
GO:0051253 negative regulation of RNA metabolic process 8.22% (6/73) 2.54 0.000581 0.003348
GO:0006886 intracellular protein transport 12.33% (9/73) 1.92 0.000597 0.003415
GO:0010629 negative regulation of gene expression 9.59% (7/73) 2.26 0.000635 0.003611
GO:2000113 negative regulation of cellular macromolecule biosynthetic process 8.22% (6/73) 2.51 0.000655 0.003681
GO:0010558 negative regulation of macromolecule biosynthetic process 8.22% (6/73) 2.51 0.000655 0.003681
GO:0098727 maintenance of cell number 4.11% (3/73) 4.13 0.000685 0.003784
GO:0019827 stem cell population maintenance 4.11% (3/73) 4.13 0.000685 0.003784
GO:0045934 negative regulation of nucleobase-containing compound metabolic process 8.22% (6/73) 2.5 0.000681 0.003805
GO:0009870 defense response signaling pathway, resistance gene-dependent 2.74% (2/73) 5.66 0.000706 0.003873
GO:0007015 actin filament organization 5.48% (4/73) 3.3 0.000747 0.004051
GO:0031327 negative regulation of cellular biosynthetic process 8.22% (6/73) 2.47 0.000745 0.004065
GO:0098542 defense response to other organism 12.33% (9/73) 1.87 0.000771 0.004155
GO:0009890 negative regulation of biosynthetic process 8.22% (6/73) 2.46 0.000784 0.004178
GO:0016246 RNA interference 4.11% (3/73) 4.06 0.000782 0.004193
GO:0008380 RNA splicing 6.85% (5/73) 2.79 0.000798 0.004231
GO:0045184 establishment of protein localization 12.33% (9/73) 1.85 0.000825 0.004322
GO:0015031 protein transport 12.33% (9/73) 1.85 0.000825 0.004322
GO:0040029 regulation of gene expression, epigenetic 6.85% (5/73) 2.77 0.000852 0.004439
GO:0008104 protein localization 12.33% (9/73) 1.84 0.000895 0.004638
GO:0000278 mitotic cell cycle 5.48% (4/73) 3.23 0.000902 0.004649
GO:0071702 organic substance transport 16.44% (12/73) 1.5 0.00097 0.004945
GO:0016874 ligase activity 5.48% (4/73) 3.2 0.000965 0.004949
GO:0090066 regulation of anatomical structure size 5.48% (4/73) 3.18 0.00101 0.005091
GO:0032535 regulation of cellular component size 5.48% (4/73) 3.18 0.00101 0.005091
GO:0071705 nitrogen compound transport 16.44% (12/73) 1.49 0.001023 0.005134
GO:0140101 catalytic activity, acting on a tRNA 4.11% (3/73) 3.9 0.00108 0.00539
GO:0048518 positive regulation of biological process 12.33% (9/73) 1.79 0.001151 0.005714
GO:0035194 posttranscriptional gene silencing by RNA 4.11% (3/73) 3.86 0.001165 0.005719
GO:0019438 aromatic compound biosynthetic process 15.07% (11/73) 1.56 0.001161 0.005729
GO:1901362 organic cyclic compound biosynthetic process 16.44% (12/73) 1.46 0.001211 0.005918
GO:0097659 nucleic acid-templated transcription 5.48% (4/73) 3.11 0.001226 0.005925
GO:0006351 transcription, DNA-templated 5.48% (4/73) 3.11 0.001226 0.005925
GO:0097435 supramolecular fiber organization 5.48% (4/73) 3.1 0.001252 0.006019
GO:0016458 gene silencing 6.85% (5/73) 2.64 0.001267 0.006063
GO:0010605 negative regulation of macromolecule metabolic process 9.59% (7/73) 2.09 0.001306 0.006218
GO:0009409 response to cold 9.59% (7/73) 2.08 0.00133 0.006301
GO:0003724 RNA helicase activity 2.74% (2/73) 5.17 0.001397 0.00655
GO:0033036 macromolecule localization 12.33% (9/73) 1.75 0.001397 0.006583
GO:0009059 macromolecule biosynthetic process 15.07% (11/73) 1.52 0.001459 0.006808
GO:0070035 purine NTP-dependent helicase activity 4.11% (3/73) 3.74 0.001492 0.006825
GO:0008026 ATP-dependent helicase activity 4.11% (3/73) 3.74 0.001492 0.006825
GO:0009165 nucleotide biosynthetic process 8.22% (6/73) 2.28 0.001471 0.00683
GO:1901293 nucleoside phosphate biosynthetic process 8.22% (6/73) 2.28 0.001487 0.00687
GO:0051172 negative regulation of nitrogen compound metabolic process 8.22% (6/73) 2.27 0.001536 0.006958
GO:0003002 regionalization 5.48% (4/73) 3.02 0.001532 0.006971
GO:0034613 cellular protein localization 10.96% (8/73) 1.86 0.001566 0.007058
GO:0016441 posttranscriptional gene silencing 4.11% (3/73) 3.71 0.001595 0.007157
GO:0048827 phyllome development 6.85% (5/73) 2.55 0.001677 0.007484
GO:0009892 negative regulation of metabolic process 9.59% (7/73) 2.02 0.001692 0.007517
GO:1905393 plant organ formation 5.48% (4/73) 2.97 0.001752 0.007746
GO:0015833 peptide transport 12.33% (9/73) 1.7 0.001762 0.007756
GO:0042886 amide transport 12.33% (9/73) 1.69 0.001856 0.008128
GO:0031324 negative regulation of cellular metabolic process 8.22% (6/73) 2.21 0.001875 0.008176
GO:1901564 organonitrogen compound metabolic process 28.77% (21/73) 0.94 0.00198 0.008592
GO:0019538 protein metabolic process 21.92% (16/73) 1.13 0.002047 0.0088
GO:0070727 cellular macromolecule localization 10.96% (8/73) 1.8 0.00204 0.008812
GO:0051052 regulation of DNA metabolic process 5.48% (4/73) 2.9 0.002066 0.008842
GO:0065008 regulation of biological quality 15.07% (11/73) 1.45 0.002094 0.008879
GO:0006508 proteolysis 10.96% (8/73) 1.8 0.002084 0.00888
GO:0043687 post-translational protein modification 4.11% (3/73) 3.57 0.002115 0.008927
GO:0010498 proteasomal protein catabolic process 5.48% (4/73) 2.86 0.002256 0.009483
GO:0052249 modulation of RNA levels in other organism involved in symbiotic interaction 4.11% (3/73) 3.49 0.002443 0.010131
GO:0009616 virus induced gene silencing 4.11% (3/73) 3.49 0.002443 0.010131
GO:0052018 modulation by symbiont of RNA levels in host 4.11% (3/73) 3.49 0.002443 0.010131
GO:0004015 adenosylmethionine-8-amino-7-oxononanoate transaminase activity 1.37% (1/73) 8.57 0.00264 0.010305
GO:0004141 dethiobiotin synthase activity 1.37% (1/73) 8.57 0.00264 0.010305
GO:0015288 porin activity 1.37% (1/73) 8.57 0.00264 0.010305
GO:0043388 positive regulation of DNA binding 1.37% (1/73) 8.57 0.00264 0.010305
GO:0070922 small RNA loading onto RISC 1.37% (1/73) 8.57 0.00264 0.010305
GO:0022829 wide pore channel activity 1.37% (1/73) 8.57 0.00264 0.010305
GO:0035280 miRNA loading onto RISC involved in gene silencing by miRNA 1.37% (1/73) 8.57 0.00264 0.010305
GO:0036292 DNA rewinding 1.37% (1/73) 8.57 0.00264 0.010305
GO:0047623 adenosine-phosphate deaminase activity 1.37% (1/73) 8.57 0.00264 0.010305
GO:0006431 methionyl-tRNA aminoacylation 1.37% (1/73) 8.57 0.00264 0.010305
GO:0003876 AMP deaminase activity 1.37% (1/73) 8.57 0.00264 0.010305
GO:0051099 positive regulation of binding 1.37% (1/73) 8.57 0.00264 0.010305
GO:0098586 cellular response to virus 4.11% (3/73) 3.48 0.002512 0.010372
GO:0036094 small molecule binding 12.33% (9/73) 1.62 0.002534 0.010413
GO:1901576 organic substance biosynthetic process 27.4% (20/73) 0.93 0.002685 0.010438
GO:0007267 cell-cell signaling 4.11% (3/73) 3.44 0.002728 0.01056
GO:0023052 signaling 4.11% (3/73) 3.42 0.002802 0.010802
GO:0045087 innate immune response 8.22% (6/73) 2.08 0.00293 0.011203
GO:0044464 cell part 90.41% (66/73) 0.23 0.00292 0.011211
GO:0006399 tRNA metabolic process 4.11% (3/73) 3.4 0.002954 0.011249
GO:0006955 immune response 8.22% (6/73) 2.07 0.003095 0.011737
GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction 4.11% (3/73) 3.36 0.003191 0.01191
GO:0044003 modification by symbiont of host morphology or physiology 4.11% (3/73) 3.36 0.003191 0.01191
GO:0010267 production of ta-siRNAs involved in RNA interference 4.11% (3/73) 3.36 0.003191 0.01191
GO:0035821 modification of morphology or physiology of other organism 4.11% (3/73) 3.36 0.003191 0.01191
GO:0009416 response to light stimulus 12.33% (9/73) 1.55 0.003533 0.013134
GO:0048523 negative regulation of cellular process 9.59% (7/73) 1.82 0.003656 0.013428
GO:0002253 activation of immune response 2.74% (2/73) 4.48 0.00365 0.013462
GO:0002218 activation of innate immune response 2.74% (2/73) 4.48 0.00365 0.013462
GO:0005515 protein binding 17.81% (13/73) 1.2 0.003683 0.013476
GO:0006346 methylation-dependent chromatin silencing 4.11% (3/73) 3.28 0.003701 0.013487
GO:0009058 biosynthetic process 27.4% (20/73) 0.89 0.003812 0.013838
GO:0048519 negative regulation of biological process 12.33% (9/73) 1.52 0.003928 0.014205
GO:0048869 cellular developmental process 12.33% (9/73) 1.52 0.00395 0.014229
GO:0051701 interaction with host 4.11% (3/73) 3.24 0.003973 0.014256
GO:0048522 positive regulation of cellular process 9.59% (7/73) 1.79 0.004101 0.014659
GO:0030163 protein catabolic process 5.48% (4/73) 2.62 0.004174 0.014864
GO:0006464 cellular protein modification process 15.07% (11/73) 1.32 0.004245 0.015002
GO:0036211 protein modification process 15.07% (11/73) 1.32 0.004245 0.015002
GO:0006397 mRNA processing 4.11% (3/73) 3.17 0.004553 0.01603
GO:0017111 nucleoside-triphosphatase activity 8.22% (6/73) 1.93 0.004988 0.017496
GO:0044419 interspecies interaction between organisms 4.11% (3/73) 3.12 0.005074 0.01773
GO:0000904 cell morphogenesis involved in differentiation 6.85% (5/73) 2.17 0.005139 0.01789
GO:0004825 methionine-tRNA ligase activity 1.37% (1/73) 7.57 0.005272 0.018085
GO:0051101 regulation of DNA binding 1.37% (1/73) 7.57 0.005272 0.018085
GO:0010390 histone monoubiquitination 1.37% (1/73) 7.57 0.005272 0.018085
GO:0006723 cuticle hydrocarbon biosynthetic process 1.37% (1/73) 7.57 0.005272 0.018085
GO:0070646 protein modification by small protein removal 4.11% (3/73) 3.08 0.005403 0.018464
GO:0044249 cellular biosynthetic process 24.66% (18/73) 0.91 0.005545 0.018882
GO:0009560 embryo sac egg cell differentiation 4.11% (3/73) 3.04 0.005861 0.019812
GO:0009605 response to external stimulus 16.44% (12/73) 1.19 0.005857 0.019871
GO:0045089 positive regulation of innate immune response 2.74% (2/73) 4.11 0.006052 0.020384
GO:0048449 floral organ formation 4.11% (3/73) 3.02 0.006098 0.020394
GO:0006950 response to stress 24.66% (18/73) 0.89 0.006094 0.020452
GO:0051179 localization 21.92% (16/73) 0.97 0.006266 0.020732
GO:0016462 pyrophosphatase activity 8.22% (6/73) 1.86 0.006251 0.020756
GO:0099402 plant organ development 8.22% (6/73) 1.86 0.006251 0.020756
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 8.22% (6/73) 1.86 0.006298 0.020765
GO:0016817 hydrolase activity, acting on acid anhydrides 8.22% (6/73) 1.85 0.006491 0.021323
GO:0002684 positive regulation of immune system process 2.74% (2/73) 4.04 0.006599 0.021527
GO:0050778 positive regulation of immune response 2.74% (2/73) 4.04 0.006599 0.021527
GO:0051707 response to other organism 12.33% (9/73) 1.4 0.006778 0.022035
GO:0006952 defense response 12.33% (9/73) 1.4 0.006845 0.022174
GO:0016571 histone methylation 5.48% (4/73) 2.41 0.006888 0.022238
GO:0030554 adenyl nucleotide binding 6.85% (5/73) 2.06 0.00696 0.022315
GO:0032559 adenyl ribonucleotide binding 6.85% (5/73) 2.06 0.00696 0.022315
GO:0006479 protein methylation 5.48% (4/73) 2.4 0.007142 0.022666
GO:0008213 protein alkylation 5.48% (4/73) 2.4 0.007142 0.022666
GO:0050794 regulation of cellular process 26.03% (19/73) 0.84 0.007135 0.022798
GO:0031349 positive regulation of defense response 2.74% (2/73) 3.95 0.00746 0.023592
GO:0051607 defense response to virus 4.11% (3/73) 2.91 0.007508 0.023664
GO:0009630 gravitropism 4.11% (3/73) 2.88 0.007923 0.024315
GO:0048569 post-embryonic animal organ development 1.37% (1/73) 6.98 0.007898 0.024321
GO:0016882 cyclo-ligase activity 1.37% (1/73) 6.98 0.007898 0.024321
GO:0006611 protein export from nucleus 1.37% (1/73) 6.98 0.007898 0.024321
GO:0030089 phycobilisome 1.37% (1/73) 6.98 0.007898 0.024321
GO:0009102 biotin biosynthetic process 1.37% (1/73) 6.98 0.007898 0.024321
GO:0007009 plasma membrane organization 1.37% (1/73) 6.98 0.007898 0.024321
GO:0006768 biotin metabolic process 1.37% (1/73) 6.98 0.007898 0.024321
GO:0050789 regulation of biological process 28.77% (21/73) 0.77 0.008093 0.024756
GO:0019219 regulation of nucleobase-containing compound metabolic process 16.44% (12/73) 1.12 0.008291 0.025281
GO:0043247 telomere maintenance in response to DNA damage 2.74% (2/73) 3.86 0.008368 0.025432
GO:0032774 RNA biosynthetic process 5.48% (4/73) 2.33 0.00841 0.025475
GO:0048646 anatomical structure formation involved in morphogenesis 5.48% (4/73) 2.32 0.008602 0.025973
GO:0010608 posttranscriptional regulation of gene expression 4.11% (3/73) 2.83 0.008793 0.026463
GO:0043231 intracellular membrane-bounded organelle 73.97% (54/73) 0.3 0.008862 0.026587
GO:0032204 regulation of telomere maintenance 2.74% (2/73) 3.81 0.009 0.026915
GO:0009629 response to gravity 4.11% (3/73) 2.81 0.009094 0.027109
GO:0043227 membrane-bounded organelle 73.97% (54/73) 0.3 0.00927 0.027457
GO:0051704 multi-organism process 12.33% (9/73) 1.33 0.009256 0.027504
GO:0006094 gluconeogenesis 4.11% (3/73) 2.79 0.009402 0.027761
GO:0009606 tropism 4.11% (3/73) 2.78 0.009716 0.028597
GO:0019319 hexose biosynthetic process 4.11% (3/73) 2.77 0.009876 0.028975
GO:0016574 histone ubiquitination 1.37% (1/73) 6.57 0.010518 0.030287
GO:0051082 unfolded protein binding 1.37% (1/73) 6.57 0.010518 0.030287
GO:0033523 histone H2B ubiquitination 1.37% (1/73) 6.57 0.010518 0.030287
GO:0010449 root meristem growth 1.37% (1/73) 6.57 0.010518 0.030287
GO:0043207 response to external biotic stimulus 12.33% (9/73) 1.3 0.010357 0.030291
GO:0044281 small molecule metabolic process 19.18% (14/73) 0.97 0.010562 0.030322
GO:0009607 response to biotic stimulus 12.33% (9/73) 1.3 0.010403 0.03033
GO:0001510 RNA methylation 4.11% (3/73) 2.72 0.010695 0.030608
GO:0005996 monosaccharide metabolic process 5.48% (4/73) 2.21 0.011138 0.031778
GO:0032200 telomere organization 2.74% (2/73) 3.61 0.011733 0.033274
GO:0000723 telomere maintenance 2.74% (2/73) 3.61 0.011733 0.033274
GO:0060249 anatomical structure homeostasis 2.74% (2/73) 3.59 0.012098 0.033997
GO:0006306 DNA methylation 4.11% (3/73) 2.66 0.012086 0.034066
GO:0006305 DNA alkylation 4.11% (3/73) 2.66 0.012086 0.034066
GO:0009615 response to virus 4.11% (3/73) 2.65 0.012266 0.034265
GO:0046364 monosaccharide biosynthetic process 4.11% (3/73) 2.65 0.012266 0.034265
GO:0043413 macromolecule glycosylation 4.11% (3/73) 2.63 0.012632 0.034563
GO:0006486 protein glycosylation 4.11% (3/73) 2.63 0.012632 0.034563
GO:0006304 DNA modification 4.11% (3/73) 2.63 0.012632 0.034563
GO:0070085 glycosylation 4.11% (3/73) 2.63 0.012632 0.034563
GO:0044728 DNA methylation or demethylation 4.11% (3/73) 2.64 0.012449 0.034567
GO:0043229 intracellular organelle 73.97% (54/73) 0.28 0.012419 0.034588
GO:0043226 organelle 73.97% (54/73) 0.28 0.012539 0.034716
GO:0009266 response to temperature stimulus 9.59% (7/73) 1.47 0.01295 0.035328
GO:0016973 poly(A)+ mRNA export from nucleus 1.37% (1/73) 6.24 0.01313 0.035405
GO:0034399 nuclear periphery 1.37% (1/73) 6.24 0.01313 0.035405
GO:0004709 MAP kinase kinase kinase activity 1.37% (1/73) 6.24 0.01313 0.035405
GO:0006513 protein monoubiquitination 1.37% (1/73) 6.24 0.01313 0.035405
GO:0022412 cellular process involved in reproduction in multicellular organism 4.11% (3/73) 2.6 0.013384 0.035985
GO:0016071 mRNA metabolic process 5.48% (4/73) 2.13 0.013456 0.036075
GO:0034660 ncRNA metabolic process 5.48% (4/73) 2.12 0.013585 0.036319
GO:0005737 cytoplasm 21.92% (16/73) 0.84 0.013995 0.0372
GO:0016570 histone modification 5.48% (4/73) 2.11 0.01398 0.037266
GO:0009117 nucleotide metabolic process 8.22% (6/73) 1.6 0.014286 0.037865
GO:0010073 meristem maintenance 2.74% (2/73) 3.46 0.014385 0.038021
GO:0006753 nucleoside phosphate metabolic process 8.22% (6/73) 1.59 0.014544 0.038331
GO:0051171 regulation of nitrogen compound metabolic process 16.44% (12/73) 1.0 0.01527 0.040133
GO:0003964 RNA-directed DNA polymerase activity 1.37% (1/73) 5.98 0.015735 0.040781
GO:0006278 RNA-dependent DNA biosynthetic process 1.37% (1/73) 5.98 0.015735 0.040781
GO:0051098 regulation of binding 1.37% (1/73) 5.98 0.015735 0.040781
GO:2000012 regulation of auxin polar transport 1.37% (1/73) 5.98 0.015735 0.040781
GO:0016208 AMP binding 1.37% (1/73) 5.98 0.015735 0.040781
GO:0007010 cytoskeleton organization 5.48% (4/73) 2.05 0.015917 0.041136
GO:0004540 ribonuclease activity 2.74% (2/73) 3.38 0.016006 0.041252
GO:0007165 signal transduction 12.33% (9/73) 1.19 0.016479 0.042355
GO:0010332 response to gamma radiation 2.74% (2/73) 3.34 0.016844 0.043174
GO:0043168 anion binding 8.22% (6/73) 1.54 0.017013 0.043489
GO:0003743 translation initiation factor activity 2.74% (2/73) 3.26 0.018576 0.047352
GO:0005975 carbohydrate metabolic process 10.96% (8/73) 1.25 0.018872 0.047978
GO:0044267 cellular protein metabolic process 15.07% (11/73) 1.01 0.019242 0.048786
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_11 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_139 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_163 0.035 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_220 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_67 0.035 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_74 0.052 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_132 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_147 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_172 0.043 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_230 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_231 0.05 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_259 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_260 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_40 0.039 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_131 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_144 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_41 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_175 0.051 Archaeplastida Compare
Gingko biloba HCCA Cluster_216 0.031 Archaeplastida Compare
Gingko biloba HCCA Cluster_223 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_256 0.026 Archaeplastida Compare
Gingko biloba HCCA Cluster_264 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_289 0.048 Archaeplastida Compare
Gingko biloba HCCA Cluster_324 0.052 Archaeplastida Compare
Gingko biloba HCCA Cluster_338 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_56 0.071 Archaeplastida Compare
Zea mays HCCA Cluster_61 0.041 Archaeplastida Compare
Zea mays HCCA Cluster_195 0.039 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.075 Archaeplastida Compare
Zea mays HCCA Cluster_225 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_229 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_267 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_290 0.049 Archaeplastida Compare
Zea mays HCCA Cluster_310 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_352 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_16 0.036 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_22 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_24 0.041 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_61 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_68 0.027 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.035 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_132 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_175 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_8 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_95 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_146 0.046 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.067 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_169 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_176 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_237 0.06 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_263 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_272 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_274 0.04 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_286 0.042 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_290 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_32 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_64 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_220 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_238 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_256 0.048 Archaeplastida Compare
Picea abies HCCA Cluster_287 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_321 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_359 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_393 0.058 Archaeplastida Compare
Picea abies HCCA Cluster_403 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_409 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_420 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_472 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_478 0.043 Archaeplastida Compare
Picea abies HCCA Cluster_491 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_516 0.06 Archaeplastida Compare
Picea abies HCCA Cluster_523 0.036 Archaeplastida Compare
Oryza sativa HCCA Cluster_40 0.033 Archaeplastida Compare
Oryza sativa HCCA Cluster_72 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.059 Archaeplastida Compare
Oryza sativa HCCA Cluster_141 0.077 Archaeplastida Compare
Oryza sativa HCCA Cluster_188 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_206 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_219 0.042 Archaeplastida Compare
Oryza sativa HCCA Cluster_269 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_273 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_297 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_316 0.036 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_31 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_36 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_75 0.078 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_84 0.03 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_108 0.049 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_141 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_22 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.056 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_127 0.038 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_131 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_173 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_182 0.036 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_202 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_221 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_233 0.039 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_243 0.051 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_252 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_260 0.048 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_264 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_275 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_54 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_56 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_84 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_106 0.042 Archaeplastida Compare
Vitis vinifera HCCA Cluster_123 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_164 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_181 0.102 Archaeplastida Compare
Vitis vinifera HCCA Cluster_196 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_220 0.041 Archaeplastida Compare
Vitis vinifera HCCA Cluster_221 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_222 0.033 Archaeplastida Compare
Vitis vinifera HCCA Cluster_233 0.038 Archaeplastida Compare
Vitis vinifera HCCA Cluster_241 0.027 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_56 0.04 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_60 0.055 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_62 0.027 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_77 0.043 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_87 0.03 Archaeplastida Compare
Sequences (73) (download table)

InterPro Domains

GO Terms

Family Terms