0.022 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_61 0.02 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_62 0.023 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_66 0.02 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_67 0.054 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_70 0.027 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_79 0.038 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_80 0.023 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_81 0.041 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_94 0.023 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_95 0.036 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_110 0.021 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_115 0.02 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_119 0.028 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_123 0.046 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_126 0.023 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_133 0.024 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_138 0.027 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_139 0.031 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_144 0.036 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_147 0.022 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_149 0.023 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_152 0.032 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_155 0.027 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_156 0.02 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_157 0.022 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_158 0.029 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_159 0.033 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_160 0.032 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_171 0.046 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_176 0.029 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_190 0.036 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_197 0.027 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_208 0.029 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_212 0.028 Archaeplastida Compare Selaginella moellendorffii HCCA Cluster_213 0.022 Archaeplastida Compare Solanum lycopersicum HCCA Cluster_3 0.028 Archaeplastida Compare Solanum lycopersicum HCCA Cluster_6 0.037 Archaeplastida Compare Solanum lycopersicum HCCA Cluster_7 0.05 Archaeplastida Compare Solanum lycopersicum HCCA Cluster_8 0.023 Archaeplastida Compare Solanum lycopersicum HCCA Cluster_11 0.079 Archaeplastida Compare Solanum lycopersicum HCCA Cluster_13 0.033 Archaeplastida Compare Solanum lycopersicum HCCA Cluster_14 0.041 Archaeplastida Compare Solanum lycopersicum HCCA Cluster_23 0.024 Archaeplastida Compare Solanum lycopersicum HCCA Cluster_27 0.041 Archaeplastida Compare Solanum lycopersicum HCCA Cluster_28 0.038 Archaeplastida Compare Solanum lycopersicum HCCA Cluster_29 0.026 Archaeplastida Compare Solanum lycopersicum HCCA Cluster_34 0.047 Archaeplastida Compare Solanum lycopersicum HCCA Cluster_36 0.025 Archaeplastida Compare Solanum lycopersicum HCCA Cluster_37 0.071 Archaeplastida Compare Solanum lycopersicum HCCA Cluster_38 0.035 Archaeplastida Compare Solanum lycopersicum HCCA Cluster_39 0.044 Archaeplastida Compare Solanum lycopersicum HCCA Cluster_41 0.049 Archaeplastida Compare Solanum lycopersicum HCCA Cluster_42 0.021 Archaeplastida Compare Solanum lycopersicum Gb_22841 details
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  5. Gb_22841

Gb_22841


Description : Protein BPS1, chloroplastic OS=Arabidopsis thaliana (sp|q9lmm6|bps1_arath : 182.0)


Gene families : OG0001116 (Archaeplastida) Phylogenetic Tree(s): OG0001116_tree ,
OG_05_0000681 (LandPlants) Phylogenetic Tree(s): OG_05_0000681_tree ,
OG_06_0002969 (SeedPlants) Phylogenetic Tree(s): OG_06_0002969_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_22841
Cluster HCCA: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00251380 evm_27.TU.AmTr_v1... Protein BPS1, chloroplastic OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G01550 BPS1 Protein of unknown function (DUF793) 0.03 Archaeplastida
Gb_18309 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_18312 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10430865g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_130577g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c23_10870V3.1 No alias Protein of unknown function (DUF793) 0.02 Archaeplastida
Pp3c3_8570V3.1 No alias Protein of unknown function (DUF793) 0.02 Archaeplastida
Smo440489 No alias No description available 0.03 Archaeplastida

HCCA
Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008883 glutamyl-tRNA reductase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR008511 Protein_BYPASS-related 166 328
No external refs found!