AT2G37040 (ATPAL1, PAL1)


Aliases : ATPAL1, PAL1

Description : PHE ammonia lyase 1


Gene families : OG0000239 (Archaeplastida) Phylogenetic Tree(s): OG0000239_tree ,
OG_05_0000119 (LandPlants) Phylogenetic Tree(s): OG_05_0000119_tree ,
OG_06_0000357 (SeedPlants) Phylogenetic Tree(s): OG_06_0000357_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G37040
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00201680 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.06 Archaeplastida
AMTR_s00024p00201930 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
AMTR_s00024p00202590 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 Archaeplastida
AMTR_s00032p00159210 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 Archaeplastida
AMTR_s00148p00088930 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 Archaeplastida
GSVIVT01015138001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
GSVIVT01016257001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.07 Archaeplastida
GSVIVT01024292001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 Archaeplastida
GSVIVT01024293001 No alias Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.03 Archaeplastida
GSVIVT01024294001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
GSVIVT01024295001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 Archaeplastida
GSVIVT01024299001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
GSVIVT01024303001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
GSVIVT01024306001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
GSVIVT01024315001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
GSVIVT01025214001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.06 Archaeplastida
GSVIVT01025703001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.09 Archaeplastida
Gb_01672 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Gb_16672 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Gb_21115 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Gb_25608 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Gb_41796 No alias phenylalanine ammonia lyase (PAL) 0.05 Archaeplastida
LOC_Os02g41630.2 No alias phenylalanine ammonia lyase (PAL) 0.13 Archaeplastida
LOC_Os02g41650.3 No alias phenylalanine ammonia lyase (PAL) 0.1 Archaeplastida
LOC_Os02g41670.1 No alias phenylalanine ammonia lyase (PAL) 0.07 Archaeplastida
LOC_Os02g41680.1 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
LOC_Os04g43760.1 No alias phenylalanine ammonia lyase (PAL) 0.12 Archaeplastida
LOC_Os04g43800.1 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
LOC_Os05g35290.1 No alias phenylalanine ammonia lyase (PAL) 0.05 Archaeplastida
MA_123220g0010 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
MA_189052g0010 No alias Phenylalanine ammonia-lyase OS=Pinus taeda... 0.03 Archaeplastida
MA_44561g0010 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
MA_632036g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_73113g0010 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Mp1g05190.1 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
Mp4g14110.1 No alias phenylalanine ammonia lyase (PAL) 0.02 Archaeplastida
Mp4g14140.1 No alias phenylalanine ammonia lyase (PAL) 0.09 Archaeplastida
Mp4g14160.1 No alias phenylalanine ammonia lyase (PAL) 0.07 Archaeplastida
Mp4g14170.1 No alias phenylalanine ammonia lyase (PAL) 0.07 Archaeplastida
Mp4g14210.1 No alias phenylalanine ammonia lyase (PAL) 0.02 Archaeplastida
Mp7g14880.1 No alias phenylalanine ammonia lyase (PAL) 0.02 Archaeplastida
Pp3c10_21810V3.1 No alias phenylalanine ammonia-lyase 4 0.05 Archaeplastida
Pp3c13_9000V3.1 No alias phenylalanine ammonia-lyase 4 0.05 Archaeplastida
Pp3c14_11870V3.1 No alias PHE ammonia lyase 1 0.05 Archaeplastida
Pp3c19_13690V3.1 No alias phenylalanine ammonia-lyase 4 0.06 Archaeplastida
Pp3c1_18830V3.1 No alias PHE ammonia lyase 1 0.05 Archaeplastida
Pp3c1_18940V3.1 No alias PHE ammonia lyase 1 0.06 Archaeplastida
Pp3c21_7640V3.1 No alias phenylalanine ammonia-lyase 2 0.02 Archaeplastida
Pp3c21_7680V3.1 No alias phenylalanine ammonia-lyase 4 0.02 Archaeplastida
Pp3c24_13110V3.1 No alias phenylalanine ammonia-lyase 4 0.03 Archaeplastida
Pp3c2_30610V3.1 No alias phenylalanine ammonia-lyase 4 0.07 Archaeplastida
Pp3c2_32330V3.1 No alias phenylalanine ammonia-lyase 4 0.03 Archaeplastida
Pp3c2_32410V3.1 No alias phenylalanine ammonia-lyase 4 0.05 Archaeplastida
Smo424403 No alias Phenylalanine ammonia-lyase OS=Citrus limon 0.02 Archaeplastida
Solyc00g500095.1.1 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
Solyc00g500353.1.1 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
Solyc03g042560.3.1 No alias phenylalanine ammonia lyase (PAL) 0.07 Archaeplastida
Solyc03g078280.3.1 No alias Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... 0.05 Archaeplastida
Solyc05g056170.3.1 No alias phenylalanine ammonia lyase (PAL) 0.09 Archaeplastida
Solyc09g007910.4.1 No alias phenylalanine ammonia lyase (PAL) 0.07 Archaeplastida
Solyc10g011925.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc10g086180.2.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Zm00001e005064_P001 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Zm00001e007572_P001 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Zm00001e015155_P001 No alias phenylalanine ammonia lyase (PAL) 0.07 Archaeplastida
Zm00001e015157_P001 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Zm00001e023031_P002 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Zm00001e023032_P002 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Zm00001e023033_P001 No alias phenylalanine ammonia lyase (PAL) 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006598 polyamine catabolic process RCA Interproscan
BP GO:0006952 defense response TAS Interproscan
BP GO:0006979 response to oxidative stress IEP Interproscan
BP GO:0009555 pollen development IMP Interproscan
BP GO:0009611 response to wounding RCA Interproscan
BP GO:0009611 response to wounding TAS Interproscan
BP GO:0009698 phenylpropanoid metabolic process RCA Interproscan
BP GO:0009699 phenylpropanoid biosynthetic process TAS Interproscan
BP GO:0009805 coumarin biosynthetic process RCA Interproscan
BP GO:0009819 drought recovery IMP Interproscan
BP GO:0009963 positive regulation of flavonoid biosynthetic process RCA Interproscan
BP GO:0010224 response to UV-B IMP Interproscan
BP GO:0042398 cellular modified amino acid biosynthetic process RCA Interproscan
MF GO:0045548 phenylalanine ammonia-lyase activity IDA Interproscan
MF GO:0045548 phenylalanine ammonia-lyase activity ISS Interproscan
MF GO:0045548 phenylalanine ammonia-lyase activity TAS Interproscan
BP GO:0046244 salicylic acid catabolic process IMP Interproscan
BP GO:0046274 lignin catabolic process IMP Interproscan
BP GO:0080167 response to karrikin IEP Interproscan
Type GO Term Name Evidence Source
BP GO:0002679 respiratory burst involved in defense response IEP Neighborhood
BP GO:0002682 regulation of immune system process IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Neighborhood
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
CC GO:0005884 actin filament IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009645 response to low light intensity stimulus IEP Neighborhood
BP GO:0009785 blue light signaling pathway IEP Neighborhood
BP GO:0009806 lignan metabolic process IEP Neighborhood
BP GO:0009807 lignan biosynthetic process IEP Neighborhood
BP GO:0009809 lignin biosynthetic process IEP Neighborhood
BP GO:0010200 response to chitin IEP Neighborhood
BP GO:0010243 response to organonitrogen compound IEP Neighborhood
BP GO:0010244 response to low fluence blue light stimulus by blue low-fluence system IEP Neighborhood
MF GO:0010283 pinoresinol reductase activity IEP Neighborhood
BP GO:0010363 regulation of plant-type hypersensitive response IEP Neighborhood
BP GO:0010941 regulation of cell death IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
CC GO:0015630 microtubule cytoskeleton IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015804 neutral amino acid transport IEP Neighborhood
BP GO:0015824 proline transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016207 4-coumarate-CoA ligase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016621 cinnamoyl-CoA reductase activity IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016710 trans-cinnamate 4-monooxygenase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0019632 shikimate metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0030522 intracellular receptor signaling pathway IEP Neighborhood
BP GO:0031347 regulation of defense response IEP Neighborhood
MF GO:0042409 caffeoyl-CoA O-methyltransferase activity IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0042754 negative regulation of circadian rhythm IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043067 regulation of programmed cell death IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0045088 regulation of innate immune response IEP Neighborhood
MF GO:0045551 cinnamyl-alcohol dehydrogenase activity IEP Neighborhood
BP GO:0045730 respiratory burst IEP Neighborhood
MF GO:0046409 p-coumarate 3-hydroxylase activity IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0047172 shikimate O-hydroxycinnamoyltransferase activity IEP Neighborhood
MF GO:0047205 quinate O-hydroxycinnamoyltransferase activity IEP Neighborhood
MF GO:0050734 hydroxycinnamoyltransferase activity IEP Neighborhood
MF GO:0050737 O-hydroxycinnamoyltransferase activity IEP Neighborhood
BP GO:0050776 regulation of immune response IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051865 protein autoubiquitination IEP Neighborhood
BP GO:0052031 modulation by symbiont of host defense response IEP Neighborhood
BP GO:0052033 pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response IEP Neighborhood
BP GO:0052166 positive regulation by symbiont of host innate immune response IEP Neighborhood
BP GO:0052167 modulation by symbiont of host innate immune response IEP Neighborhood
BP GO:0052169 pathogen-associated molecular pattern dependent modulation by symbiont of host innate immune response IEP Neighborhood
BP GO:0052173 response to defenses of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052200 response to host defenses IEP Neighborhood
BP GO:0052255 modulation by organism of defense response of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052257 pathogen-associated molecular pattern dependent induction by organism of innate immune response of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052305 positive regulation by organism of innate immune response in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052306 modulation by organism of innate immune response in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052308 pathogen-associated molecular pattern dependent modulation by organism of innate immune response in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052509 positive regulation by symbiont of host defense response IEP Neighborhood
BP GO:0052510 positive regulation by organism of defense response of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052552 modulation by organism of immune response of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052553 modulation by symbiont of host immune response IEP Neighborhood
BP GO:0052555 positive regulation by organism of immune response of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052556 positive regulation by symbiont of host immune response IEP Neighborhood
BP GO:0052564 response to immune response of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052572 response to host immune response IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0075136 response to host IEP Neighborhood
MF GO:0080107 8-methylthiopropyl glucosinolate S-oxygenase activity IEP Neighborhood
BP GO:0080135 regulation of cellular response to stress IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 72 546
No external refs found!