Aliases : ATPAL1, PAL1
Description : PHE ammonia lyase 1
Gene families : OG0000239 (Archaeplastida) Phylogenetic Tree(s): OG0000239_tree ,
OG_05_0000119 (LandPlants) Phylogenetic Tree(s): OG_05_0000119_tree ,
OG_06_0000357 (SeedPlants) Phylogenetic Tree(s): OG_06_0000357_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT2G37040 | |
Cluster | HCCA: Cluster_32 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00024p00201680 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.06 | Archaeplastida | |
AMTR_s00024p00201930 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | Archaeplastida | |
AMTR_s00024p00202590 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.05 | Archaeplastida | |
AMTR_s00032p00159210 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.05 | Archaeplastida | |
AMTR_s00148p00088930 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.05 | Archaeplastida | |
GSVIVT01015138001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | Archaeplastida | |
GSVIVT01016257001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.07 | Archaeplastida | |
GSVIVT01024292001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.05 | Archaeplastida | |
GSVIVT01024293001 | No alias | Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... | 0.03 | Archaeplastida | |
GSVIVT01024294001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
GSVIVT01024295001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.05 | Archaeplastida | |
GSVIVT01024299001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
GSVIVT01024303001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
GSVIVT01024306001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
GSVIVT01024315001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
GSVIVT01025214001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.06 | Archaeplastida | |
GSVIVT01025703001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.09 | Archaeplastida | |
Gb_01672 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
Gb_16672 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
Gb_21115 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
Gb_25608 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
Gb_41796 | No alias | phenylalanine ammonia lyase (PAL) | 0.05 | Archaeplastida | |
LOC_Os02g41630.2 | No alias | phenylalanine ammonia lyase (PAL) | 0.13 | Archaeplastida | |
LOC_Os02g41650.3 | No alias | phenylalanine ammonia lyase (PAL) | 0.1 | Archaeplastida | |
LOC_Os02g41670.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.07 | Archaeplastida | |
LOC_Os02g41680.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.06 | Archaeplastida | |
LOC_Os04g43760.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.12 | Archaeplastida | |
LOC_Os04g43800.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
LOC_Os05g35290.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.05 | Archaeplastida | |
MA_123220g0010 | No alias | phenylalanine ammonia lyase (PAL) | 0.06 | Archaeplastida | |
MA_189052g0010 | No alias | Phenylalanine ammonia-lyase OS=Pinus taeda... | 0.03 | Archaeplastida | |
MA_44561g0010 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
MA_632036g0010 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
MA_73113g0010 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
Mp1g05190.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.06 | Archaeplastida | |
Mp4g14110.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
Mp4g14140.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.09 | Archaeplastida | |
Mp4g14160.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.07 | Archaeplastida | |
Mp4g14170.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.07 | Archaeplastida | |
Mp4g14210.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
Mp7g14880.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
Pp3c10_21810V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.05 | Archaeplastida | |
Pp3c13_9000V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.05 | Archaeplastida | |
Pp3c14_11870V3.1 | No alias | PHE ammonia lyase 1 | 0.05 | Archaeplastida | |
Pp3c19_13690V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.06 | Archaeplastida | |
Pp3c1_18830V3.1 | No alias | PHE ammonia lyase 1 | 0.05 | Archaeplastida | |
Pp3c1_18940V3.1 | No alias | PHE ammonia lyase 1 | 0.06 | Archaeplastida | |
Pp3c21_7640V3.1 | No alias | phenylalanine ammonia-lyase 2 | 0.02 | Archaeplastida | |
Pp3c21_7680V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.02 | Archaeplastida | |
Pp3c24_13110V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.03 | Archaeplastida | |
Pp3c2_30610V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.07 | Archaeplastida | |
Pp3c2_32330V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.03 | Archaeplastida | |
Pp3c2_32410V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.05 | Archaeplastida | |
Smo424403 | No alias | Phenylalanine ammonia-lyase OS=Citrus limon | 0.02 | Archaeplastida | |
Solyc00g500095.1.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.06 | Archaeplastida | |
Solyc00g500353.1.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.06 | Archaeplastida | |
Solyc03g042560.3.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.07 | Archaeplastida | |
Solyc03g078280.3.1 | No alias | Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... | 0.05 | Archaeplastida | |
Solyc05g056170.3.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.09 | Archaeplastida | |
Solyc09g007910.4.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.07 | Archaeplastida | |
Solyc10g011925.1.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
Solyc10g086180.2.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
Zm00001e005064_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
Zm00001e007572_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
Zm00001e015155_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.07 | Archaeplastida | |
Zm00001e015157_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
Zm00001e023031_P002 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
Zm00001e023032_P002 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
Zm00001e023033_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.08 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IPI | Interproscan |
CC | GO:0005737 | cytoplasm | ISM | Interproscan |
BP | GO:0006598 | polyamine catabolic process | RCA | Interproscan |
BP | GO:0006952 | defense response | TAS | Interproscan |
BP | GO:0006979 | response to oxidative stress | IEP | Interproscan |
BP | GO:0009555 | pollen development | IMP | Interproscan |
BP | GO:0009611 | response to wounding | RCA | Interproscan |
BP | GO:0009611 | response to wounding | TAS | Interproscan |
BP | GO:0009698 | phenylpropanoid metabolic process | RCA | Interproscan |
BP | GO:0009699 | phenylpropanoid biosynthetic process | TAS | Interproscan |
BP | GO:0009805 | coumarin biosynthetic process | RCA | Interproscan |
BP | GO:0009819 | drought recovery | IMP | Interproscan |
BP | GO:0009963 | positive regulation of flavonoid biosynthetic process | RCA | Interproscan |
BP | GO:0010224 | response to UV-B | IMP | Interproscan |
BP | GO:0042398 | cellular modified amino acid biosynthetic process | RCA | Interproscan |
MF | GO:0045548 | phenylalanine ammonia-lyase activity | IDA | Interproscan |
MF | GO:0045548 | phenylalanine ammonia-lyase activity | ISS | Interproscan |
MF | GO:0045548 | phenylalanine ammonia-lyase activity | TAS | Interproscan |
BP | GO:0046244 | salicylic acid catabolic process | IMP | Interproscan |
BP | GO:0046274 | lignin catabolic process | IMP | Interproscan |
BP | GO:0080167 | response to karrikin | IEP | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0002679 | respiratory burst involved in defense response | IEP | Neighborhood |
BP | GO:0002682 | regulation of immune system process | IEP | Neighborhood |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
MF | GO:0003855 | 3-dehydroquinate dehydratase activity | IEP | Neighborhood |
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Neighborhood |
MF | GO:0004497 | monooxygenase activity | IEP | Neighborhood |
MF | GO:0004499 | N,N-dimethylaniline monooxygenase activity | IEP | Neighborhood |
MF | GO:0004616 | phosphogluconate dehydrogenase (decarboxylating) activity | IEP | Neighborhood |
MF | GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity | IEP | Neighborhood |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
CC | GO:0005829 | cytosol | IEP | Neighborhood |
CC | GO:0005884 | actin filament | IEP | Neighborhood |
CC | GO:0005886 | plasma membrane | IEP | Neighborhood |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Neighborhood |
BP | GO:0006605 | protein targeting | IEP | Neighborhood |
BP | GO:0006612 | protein targeting to membrane | IEP | Neighborhood |
BP | GO:0006810 | transport | IEP | Neighborhood |
BP | GO:0006811 | ion transport | IEP | Neighborhood |
BP | GO:0006820 | anion transport | IEP | Neighborhood |
BP | GO:0006865 | amino acid transport | IEP | Neighborhood |
MF | GO:0008168 | methyltransferase activity | IEP | Neighborhood |
MF | GO:0008172 | S-methyltransferase activity | IEP | Neighborhood |
BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Neighborhood |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Neighborhood |
MF | GO:0008898 | S-adenosylmethionine-homocysteine S-methyltransferase activity | IEP | Neighborhood |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Neighborhood |
BP | GO:0009645 | response to low light intensity stimulus | IEP | Neighborhood |
BP | GO:0009785 | blue light signaling pathway | IEP | Neighborhood |
BP | GO:0009806 | lignan metabolic process | IEP | Neighborhood |
BP | GO:0009807 | lignan biosynthetic process | IEP | Neighborhood |
BP | GO:0009809 | lignin biosynthetic process | IEP | Neighborhood |
BP | GO:0010200 | response to chitin | IEP | Neighborhood |
BP | GO:0010243 | response to organonitrogen compound | IEP | Neighborhood |
BP | GO:0010244 | response to low fluence blue light stimulus by blue low-fluence system | IEP | Neighborhood |
MF | GO:0010283 | pinoresinol reductase activity | IEP | Neighborhood |
BP | GO:0010363 | regulation of plant-type hypersensitive response | IEP | Neighborhood |
BP | GO:0010941 | regulation of cell death | IEP | Neighborhood |
MF | GO:0015020 | glucuronosyltransferase activity | IEP | Neighborhood |
CC | GO:0015630 | microtubule cytoskeleton | IEP | Neighborhood |
BP | GO:0015711 | organic anion transport | IEP | Neighborhood |
BP | GO:0015804 | neutral amino acid transport | IEP | Neighborhood |
BP | GO:0015824 | proline transport | IEP | Neighborhood |
BP | GO:0015833 | peptide transport | IEP | Neighborhood |
BP | GO:0015849 | organic acid transport | IEP | Neighborhood |
CC | GO:0016020 | membrane | IEP | Neighborhood |
MF | GO:0016207 | 4-coumarate-CoA ligase activity | IEP | Neighborhood |
MF | GO:0016301 | kinase activity | IEP | Neighborhood |
MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Neighborhood |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
MF | GO:0016621 | cinnamoyl-CoA reductase activity | IEP | Neighborhood |
MF | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | IEP | Neighborhood |
MF | GO:0016710 | trans-cinnamate 4-monooxygenase activity | IEP | Neighborhood |
MF | GO:0016740 | transferase activity | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Neighborhood |
BP | GO:0019632 | shikimate metabolic process | IEP | Neighborhood |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
BP | GO:0030522 | intracellular receptor signaling pathway | IEP | Neighborhood |
BP | GO:0031347 | regulation of defense response | IEP | Neighborhood |
MF | GO:0042409 | caffeoyl-CoA O-methyltransferase activity | IEP | Neighborhood |
BP | GO:0042493 | response to drug | IEP | Neighborhood |
BP | GO:0042754 | negative regulation of circadian rhythm | IEP | Neighborhood |
BP | GO:0042886 | amide transport | IEP | Neighborhood |
BP | GO:0043067 | regulation of programmed cell death | IEP | Neighborhood |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Neighborhood |
BP | GO:0045088 | regulation of innate immune response | IEP | Neighborhood |
MF | GO:0045551 | cinnamyl-alcohol dehydrogenase activity | IEP | Neighborhood |
BP | GO:0045730 | respiratory burst | IEP | Neighborhood |
MF | GO:0046409 | p-coumarate 3-hydroxylase activity | IEP | Neighborhood |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Neighborhood |
BP | GO:0046907 | intracellular transport | IEP | Neighborhood |
BP | GO:0046942 | carboxylic acid transport | IEP | Neighborhood |
MF | GO:0047172 | shikimate O-hydroxycinnamoyltransferase activity | IEP | Neighborhood |
MF | GO:0047205 | quinate O-hydroxycinnamoyltransferase activity | IEP | Neighborhood |
MF | GO:0050734 | hydroxycinnamoyltransferase activity | IEP | Neighborhood |
MF | GO:0050737 | O-hydroxycinnamoyltransferase activity | IEP | Neighborhood |
BP | GO:0050776 | regulation of immune response | IEP | Neighborhood |
BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
BP | GO:0051179 | localization | IEP | Neighborhood |
BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
BP | GO:0051865 | protein autoubiquitination | IEP | Neighborhood |
BP | GO:0052031 | modulation by symbiont of host defense response | IEP | Neighborhood |
BP | GO:0052033 | pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | IEP | Neighborhood |
BP | GO:0052166 | positive regulation by symbiont of host innate immune response | IEP | Neighborhood |
BP | GO:0052167 | modulation by symbiont of host innate immune response | IEP | Neighborhood |
BP | GO:0052169 | pathogen-associated molecular pattern dependent modulation by symbiont of host innate immune response | IEP | Neighborhood |
BP | GO:0052173 | response to defenses of other organism involved in symbiotic interaction | IEP | Neighborhood |
BP | GO:0052200 | response to host defenses | IEP | Neighborhood |
BP | GO:0052255 | modulation by organism of defense response of other organism involved in symbiotic interaction | IEP | Neighborhood |
BP | GO:0052257 | pathogen-associated molecular pattern dependent induction by organism of innate immune response of other organism involved in symbiotic interaction | IEP | Neighborhood |
BP | GO:0052305 | positive regulation by organism of innate immune response in other organism involved in symbiotic interaction | IEP | Neighborhood |
BP | GO:0052306 | modulation by organism of innate immune response in other organism involved in symbiotic interaction | IEP | Neighborhood |
BP | GO:0052308 | pathogen-associated molecular pattern dependent modulation by organism of innate immune response in other organism involved in symbiotic interaction | IEP | Neighborhood |
BP | GO:0052509 | positive regulation by symbiont of host defense response | IEP | Neighborhood |
BP | GO:0052510 | positive regulation by organism of defense response of other organism involved in symbiotic interaction | IEP | Neighborhood |
BP | GO:0052552 | modulation by organism of immune response of other organism involved in symbiotic interaction | IEP | Neighborhood |
BP | GO:0052553 | modulation by symbiont of host immune response | IEP | Neighborhood |
BP | GO:0052555 | positive regulation by organism of immune response of other organism involved in symbiotic interaction | IEP | Neighborhood |
BP | GO:0052556 | positive regulation by symbiont of host immune response | IEP | Neighborhood |
BP | GO:0052564 | response to immune response of other organism involved in symbiotic interaction | IEP | Neighborhood |
BP | GO:0052572 | response to host immune response | IEP | Neighborhood |
BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
BP | GO:0072657 | protein localization to membrane | IEP | Neighborhood |
BP | GO:0075136 | response to host | IEP | Neighborhood |
MF | GO:0080107 | 8-methylthiopropyl glucosinolate S-oxygenase activity | IEP | Neighborhood |
BP | GO:0080135 | regulation of cellular response to stress | IEP | Neighborhood |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | Neighborhood |
MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
BP | GO:1901698 | response to nitrogen compound | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001106 | Aromatic_Lyase | 72 | 546 |
No external refs found! |