AT2G38300

Description : myb-like HTH transcriptional regulator family protein

Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000101 (LandPlants) Phylogenetic Tree(s): OG_05_0000101_tree ,
OG_06_0000391 (SeedPlants) Phylogenetic Tree(s): OG_06_0000391_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G38300
Cluster	HCCA: Cluster_316

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00263730	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s00048p00125480	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.04	Archaeplastida
GSVIVT01007064001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01007065001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01020827001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01021225001	No alias	Putative Myb family transcription factor At1g14600...	0.05	Archaeplastida
GSVIVT01025502001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.04	Archaeplastida
GSVIVT01032776001	No alias	Putative Myb family transcription factor At1g14600...	0.02	Archaeplastida
Gb_25992	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
LOC_Os06g35140.1	No alias	G2-like GARP transcription factor	0.02	Archaeplastida
LOC_Os08g33750.1	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
LOC_Os11g01480.1	No alias	Putative Myb family transcription factor At1g14600...	0.03	Archaeplastida
LOC_Os12g01490.1	No alias	Putative Myb family transcription factor At1g14600...	0.03	Archaeplastida
MA_10432937g0010	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
MA_335624g0020	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
Pp3c13_9170V3.1	No alias	myb-like HTH transcriptional regulator family protein	0.03	Archaeplastida
Pp3c20_7050V3.1	No alias	Homeodomain-like superfamily protein	0.03	Archaeplastida
Solyc02g080740.3.1	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
Solyc07g045000.4.1	No alias	Putative Myb family transcription factor At1g14600...	0.03	Archaeplastida
Zm00001e003093_P001	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
Zm00001e004125_P001	No alias	G2-like GARP transcription factor	0.04	Archaeplastida
Zm00001e013758_P003	No alias	G2-like GARP transcription factor	0.04	Archaeplastida
Zm00001e014339_P001	No alias	Putative Myb family transcription factor At1g14600...	0.02	Archaeplastida
Zm00001e035893_P001	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
Zm00001e037731_P001	No alias	G2-like GARP transcription factor	0.04	Archaeplastida
Zm00001e039024_P001	No alias	G2-like GARP transcription factor	0.02	Archaeplastida
Zm00001e041868_P002	No alias	G2-like GARP transcription factor	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
MF	GO:0003729	mRNA binding	IEP	Neighborhood
MF	GO:0004712	protein serine/threonine/tyrosine kinase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005253	anion channel activity	IEP	Neighborhood
CC	GO:0005775	vacuolar lumen	IEP	Neighborhood
CC	GO:0005786	signal recognition particle, endoplasmic reticulum targeting	IEP	Neighborhood
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Neighborhood
BP	GO:0006580	ethanolamine metabolic process	IEP	Neighborhood
BP	GO:0006617	SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0006865	amino acid transport	IEP	Neighborhood
MF	GO:0008308	voltage-gated anion channel activity	IEP	Neighborhood
MF	GO:0008312	7S RNA binding	IEP	Neighborhood
MF	GO:0008509	anion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0009116	nucleoside metabolic process	IEP	Neighborhood
BP	GO:0009270	response to humidity	IEP	Neighborhood
BP	GO:0009308	amine metabolic process	IEP	Neighborhood
BP	GO:0009404	toxin metabolic process	IEP	Neighborhood
BP	GO:0009407	toxin catabolic process	IEP	Neighborhood
BP	GO:0009415	response to water	IEP	Neighborhood
MF	GO:0009672	auxin:proton symporter activity	IEP	Neighborhood
BP	GO:0009820	alkaloid metabolic process	IEP	Neighborhood
BP	GO:0009821	alkaloid biosynthetic process	IEP	Neighborhood
BP	GO:0009850	auxin metabolic process	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
BP	GO:0010037	response to carbon dioxide	IEP	Neighborhood
BP	GO:0010118	stomatal movement	IEP	Neighborhood
BP	GO:0010119	regulation of stomatal movement	IEP	Neighborhood
BP	GO:0010193	response to ozone	IEP	Neighborhood
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0010410	hemicellulose metabolic process	IEP	Neighborhood
BP	GO:0010413	glucuronoxylan metabolic process	IEP	Neighborhood
BP	GO:0010583	response to cyclopentenone	IEP	Neighborhood
BP	GO:0010817	regulation of hormone levels	IEP	Neighborhood
CC	GO:0012505	endomembrane system	IEP	Neighborhood
BP	GO:0014070	response to organic cyclic compound	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015078	proton transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015293	symporter activity	IEP	Neighborhood
MF	GO:0015294	solute:cation symporter activity	IEP	Neighborhood
MF	GO:0015295	solute:proton symporter activity	IEP	Neighborhood
MF	GO:0015301	anion:anion antiporter activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015711	organic anion transport	IEP	Neighborhood
BP	GO:0015804	neutral amino acid transport	IEP	Neighborhood
BP	GO:0015824	proline transport	IEP	Neighborhood
BP	GO:0015849	organic acid transport	IEP	Neighborhood
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Neighborhood
MF	GO:0016843	amine-lyase activity	IEP	Neighborhood
MF	GO:0016844	strictosidine synthase activity	IEP	Neighborhood
BP	GO:0016926	protein desumoylation	IEP	Neighborhood
BP	GO:0019748	secondary metabolic process	IEP	Neighborhood
MF	GO:0019825	oxygen binding	IEP	Neighborhood
MF	GO:0019901	protein kinase binding	IEP	Neighborhood
MF	GO:0022804	active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030104	water homeostasis	IEP	Neighborhood
BP	GO:0033993	response to lipid	IEP	Neighborhood
BP	GO:0034308	primary alcohol metabolic process	IEP	Neighborhood
BP	GO:0034599	cellular response to oxidative stress	IEP	Neighborhood
BP	GO:0034614	cellular response to reactive oxygen species	IEP	Neighborhood
BP	GO:0035690	cellular response to drug	IEP	Neighborhood
BP	GO:0042430	indole-containing compound metabolic process	IEP	Neighborhood
BP	GO:0042439	ethanolamine-containing compound metabolic process	IEP	Neighborhood
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Neighborhood
BP	GO:0042631	cellular response to water deprivation	IEP	Neighborhood
BP	GO:0042891	antibiotic transport	IEP	Neighborhood
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Neighborhood
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0044106	cellular amine metabolic process	IEP	Neighborhood
CC	GO:0044437	vacuolar part	IEP	Neighborhood
BP	GO:0045116	protein neddylation	IEP	Neighborhood
BP	GO:0045491	xylan metabolic process	IEP	Neighborhood
BP	GO:0045492	xylan biosynthetic process	IEP	Neighborhood
BP	GO:0046685	response to arsenic-containing substance	IEP	Neighborhood
BP	GO:0046942	carboxylic acid transport	IEP	Neighborhood
CC	GO:0048500	signal recognition particle	IEP	Neighborhood
BP	GO:0048871	multicellular organismal homeostasis	IEP	Neighborhood
BP	GO:0050878	regulation of body fluid levels	IEP	Neighborhood
BP	GO:0050891	multicellular organismal water homeostasis	IEP	Neighborhood
MF	GO:0052638	indole-3-butyrate beta-glucosyltransferase activity	IEP	Neighborhood
BP	GO:0070301	cellular response to hydrogen peroxide	IEP	Neighborhood
BP	GO:0070417	cellular response to cold	IEP	Neighborhood
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0070646	protein modification by small protein removal	IEP	Neighborhood
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Neighborhood
BP	GO:0070887	cellular response to chemical stimulus	IEP	Neighborhood
BP	GO:0071214	cellular response to abiotic stimulus	IEP	Neighborhood
BP	GO:0071215	cellular response to abscisic acid stimulus	IEP	Neighborhood
BP	GO:0071229	cellular response to acid chemical	IEP	Neighborhood
BP	GO:0071236	cellular response to antibiotic	IEP	Neighborhood
BP	GO:0071396	cellular response to lipid	IEP	Neighborhood
BP	GO:0071462	cellular response to water stimulus	IEP	Neighborhood
BP	GO:0071470	cellular response to osmotic stress	IEP	Neighborhood
BP	GO:0071472	cellular response to salt stress	IEP	Neighborhood
BP	GO:0071474	cellular hyperosmotic response	IEP	Neighborhood
BP	GO:0071475	cellular hyperosmotic salinity response	IEP	Neighborhood
BP	GO:0072347	response to anesthetic	IEP	Neighborhood
BP	GO:0080024	indolebutyric acid metabolic process	IEP	Neighborhood
MF	GO:0080161	auxin transmembrane transporter activity	IEP	Neighborhood
BP	GO:0090332	stomatal closure	IEP	Neighborhood
BP	GO:0097237	cellular response to toxic substance	IEP	Neighborhood
BP	GO:0097306	cellular response to alcohol	IEP	Neighborhood
BP	GO:0098754	detoxification	IEP	Neighborhood
BP	GO:0104004	cellular response to environmental stimulus	IEP	Neighborhood
BP	GO:1901160	primary amino compound metabolic process	IEP	Neighborhood
BP	GO:1901701	cellular response to oxygen-containing compound	IEP	Neighborhood
BP	GO:1902456	regulation of stomatal opening	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	57	107

External Links

No external refs found!

AT2G38300

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation