AT2G41540 (GPDHC1)

Aliases : GPDHC1

Description : 6-phosphogluconate dehydrogenase family protein

Gene families : OG0002581 (Archaeplastida) Phylogenetic Tree(s): OG0002581_tree ,
OG_05_0002789 (LandPlants) Phylogenetic Tree(s): OG_05_0002789_tree ,
OG_06_0003285 (SeedPlants) Phylogenetic Tree(s): OG_06_0003285_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G41540
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01033233001	No alias	Lipid metabolism.glycerolipid synthesis.phosphatidic...	0.05	Archaeplastida
LOC_Os01g71280.1	No alias	NAD-dependent glycerol-3-phosphate dehydrogenase....	0.06	Archaeplastida
MA_15670g0010	No alias	NAD-dependent glycerol-3-phosphate dehydrogenase....	0.06	Archaeplastida
Solyc04g016330.3.1	No alias	NAD-dependent glycerol-3-phosphate dehydrogenase....	0.04	Archaeplastida
Zm00001e018694_P002	No alias	NAD-dependent glycerol-3-phosphate dehydrogenase....	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004367	glycerol-3-phosphate dehydrogenase [NAD+] activity	IGI	Interproscan
MF	GO:0004367	glycerol-3-phosphate dehydrogenase [NAD+] activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0006072	glycerol-3-phosphate metabolic process	ISS	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009331	glycerol-3-phosphate dehydrogenase complex	ISS	Interproscan
BP	GO:0009413	response to flooding	IEP	Interproscan
BP	GO:0009415	response to water	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050662	coenzyme binding	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0051287	NAD binding	TAS	Interproscan
BP	GO:0052646	alditol phosphate metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000036	acyl carrier activity	IEP	Neighborhood
BP	GO:0000902	cell morphogenesis	IEP	Neighborhood
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	Neighborhood
BP	GO:0001676	long-chain fatty acid metabolic process	IEP	Neighborhood
BP	GO:0003002	regionalization	IEP	Neighborhood
BP	GO:0003006	developmental process involved in reproduction	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0003774	motor activity	IEP	Neighborhood
MF	GO:0003777	microtubule motor activity	IEP	Neighborhood
MF	GO:0004028	3-chloroallyl aldehyde dehydrogenase activity	IEP	Neighborhood
MF	GO:0004029	aldehyde dehydrogenase (NAD) activity	IEP	Neighborhood
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0004312	fatty acid synthase activity	IEP	Neighborhood
MF	GO:0004452	isopentenyl-diphosphate delta-isomerase activity	IEP	Neighborhood
MF	GO:0004467	long-chain fatty acid-CoA ligase activity	IEP	Neighborhood
MF	GO:0004497	monooxygenase activity	IEP	Neighborhood
MF	GO:0004723	calcium-dependent protein serine/threonine phosphatase activity	IEP	Neighborhood
MF	GO:0004806	triglyceride lipase activity	IEP	Neighborhood
MF	GO:0004860	protein kinase inhibitor activity	IEP	Neighborhood
MF	GO:0004861	cyclin-dependent protein serine/threonine kinase inhibitor activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
CC	GO:0005911	cell-cell junction	IEP	Neighborhood
BP	GO:0006066	alcohol metabolic process	IEP	Neighborhood
BP	GO:0006567	threonine catabolic process	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006631	fatty acid metabolic process	IEP	Neighborhood
BP	GO:0006633	fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0006720	isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0006835	dicarboxylic acid transport	IEP	Neighborhood
BP	GO:0007389	pattern specification process	IEP	Neighborhood
MF	GO:0008142	oxysterol binding	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0008361	regulation of cell size	IEP	Neighborhood
MF	GO:0008374	O-acyltransferase activity	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
MF	GO:0008970	phospholipase A1 activity	IEP	Neighborhood
MF	GO:0009044	xylan 1,4-beta-xylosidase activity	IEP	Neighborhood
CC	GO:0009505	plant-type cell wall	IEP	Neighborhood
CC	GO:0009506	plasmodesma	IEP	Neighborhood
BP	GO:0009653	anatomical structure morphogenesis	IEP	Neighborhood
BP	GO:0009664	plant-type cell wall organization	IEP	Neighborhood
BP	GO:0009739	response to gibberellin	IEP	Neighborhood
BP	GO:0009751	response to salicylic acid	IEP	Neighborhood
BP	GO:0009753	response to jasmonic acid	IEP	Neighborhood
BP	GO:0009800	cinnamic acid biosynthetic process	IEP	Neighborhood
BP	GO:0009803	cinnamic acid metabolic process	IEP	Neighborhood
BP	GO:0009826	unidimensional cell growth	IEP	Neighborhood
BP	GO:0009827	plant-type cell wall modification	IEP	Neighborhood
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	Neighborhood
BP	GO:0009888	tissue development	IEP	Neighborhood
BP	GO:0009908	flower development	IEP	Neighborhood
BP	GO:0009926	auxin polar transport	IEP	Neighborhood
BP	GO:0009932	cell tip growth	IEP	Neighborhood
BP	GO:0009938	negative regulation of gibberellic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0010015	root morphogenesis	IEP	Neighborhood
BP	GO:0010025	wax biosynthetic process	IEP	Neighborhood
BP	GO:0010093	specification of floral organ identity	IEP	Neighborhood
BP	GO:0010143	cutin biosynthetic process	IEP	Neighborhood
BP	GO:0010166	wax metabolic process	IEP	Neighborhood
BP	GO:0010325	raffinose family oligosaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0015020	glucuronosyltransferase activity	IEP	Neighborhood
MF	GO:0015140	malate transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015556	C4-dicarboxylate transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015645	fatty acid ligase activity	IEP	Neighborhood
BP	GO:0015740	C4-dicarboxylate transport	IEP	Neighborhood
BP	GO:0015743	malate transport	IEP	Neighborhood
MF	GO:0016297	acyl-[acyl-carrier-protein] hydrolase activity	IEP	Neighborhood
MF	GO:0016298	lipase activity	IEP	Neighborhood
MF	GO:0016405	CoA-ligase activity	IEP	Neighborhood
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016713	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	Neighborhood
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Neighborhood
MF	GO:0016863	intramolecular oxidoreductase activity, transposing C=C bonds	IEP	Neighborhood
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Neighborhood
MF	GO:0016878	acid-thiol ligase activity	IEP	Neighborhood
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0018685	alkane 1-monooxygenase activity	IEP	Neighborhood
MF	GO:0019210	kinase inhibitor activity	IEP	Neighborhood
BP	GO:0019432	triglyceride biosynthetic process	IEP	Neighborhood
MF	GO:0019825	oxygen binding	IEP	Neighborhood
CC	GO:0030054	cell junction	IEP	Neighborhood
MF	GO:0030291	protein serine/threonine kinase inhibitor activity	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
MF	GO:0030570	pectate lyase activity	IEP	Neighborhood
MF	GO:0031559	oxidosqualene cyclase activity	IEP	Neighborhood
MF	GO:0031957	very long-chain fatty acid-CoA ligase activity	IEP	Neighborhood
BP	GO:0032502	developmental process	IEP	Neighborhood
MF	GO:0032934	sterol binding	IEP	Neighborhood
BP	GO:0032989	cellular component morphogenesis	IEP	Neighborhood
BP	GO:0033306	phytol metabolic process	IEP	Neighborhood
MF	GO:0034007	S-linalool synthase activity	IEP	Neighborhood
BP	GO:0034308	primary alcohol metabolic process	IEP	Neighborhood
BP	GO:0040007	growth	IEP	Neighborhood
MF	GO:0042299	lupeol synthase activity	IEP	Neighborhood
MF	GO:0042300	beta-amyrin synthase activity	IEP	Neighborhood
BP	GO:0042335	cuticle development	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
BP	GO:0043446	cellular alkane metabolic process	IEP	Neighborhood
BP	GO:0043447	alkane biosynthetic process	IEP	Neighborhood
BP	GO:0043692	monoterpene metabolic process	IEP	Neighborhood
BP	GO:0043693	monoterpene biosynthetic process	IEP	Neighborhood
BP	GO:0044255	cellular lipid metabolic process	IEP	Neighborhood
MF	GO:0044620	ACP phosphopantetheine attachment site binding	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
BP	GO:0045493	xylan catabolic process	IEP	Neighborhood
MF	GO:0045551	cinnamyl-alcohol dehydrogenase activity	IEP	Neighborhood
BP	GO:0046246	terpene biosynthetic process	IEP	Neighborhood
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEP	Neighborhood
MF	GO:0046577	long-chain-alcohol oxidase activity	IEP	Neighborhood
MF	GO:0047714	galactolipase activity	IEP	Neighborhood
CC	GO:0048046	apoplast	IEP	Neighborhood
BP	GO:0048367	shoot system development	IEP	Neighborhood
BP	GO:0048437	floral organ development	IEP	Neighborhood
BP	GO:0048440	carpel development	IEP	Neighborhood
BP	GO:0048441	petal development	IEP	Neighborhood
BP	GO:0048443	stamen development	IEP	Neighborhood
BP	GO:0048444	floral organ morphogenesis	IEP	Neighborhood
BP	GO:0048481	plant ovule development	IEP	Neighborhood
BP	GO:0048507	meristem development	IEP	Neighborhood
BP	GO:0048608	reproductive structure development	IEP	Neighborhood
BP	GO:0048731	system development	IEP	Neighborhood
BP	GO:0048827	phyllome development	IEP	Neighborhood
BP	GO:0048832	specification of plant organ number	IEP	Neighborhood
BP	GO:0048833	specification of floral organ number	IEP	Neighborhood
BP	GO:0048869	cellular developmental process	IEP	Neighborhood
MF	GO:0051192	prosthetic group binding	IEP	Neighborhood
MF	GO:0052722	fatty acid in-chain hydroxylase activity	IEP	Neighborhood
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	Neighborhood
BP	GO:0071423	malate transmembrane transport	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Neighborhood
MF	GO:0071771	aldehyde decarbonylase activity	IEP	Neighborhood
MF	GO:0080176	xyloglucan 1,6-alpha-xylosidase activity	IEP	Neighborhood
MF	GO:0090447	glycerol-3-phosphate 2-O-acyltransferase activity	IEP	Neighborhood
BP	GO:0090567	reproductive shoot system development	IEP	Neighborhood
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	Neighborhood
BP	GO:0090701	specification of plant organ identity	IEP	Neighborhood
MF	GO:0097599	xylanase activity	IEP	Neighborhood
BP	GO:0099402	plant organ development	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1901568	fatty acid derivative metabolic process	IEP	Neighborhood
BP	GO:1901570	fatty acid derivative biosynthetic process	IEP	Neighborhood
BP	GO:1903173	fatty alcohol metabolic process	IEP	Neighborhood
BP	GO:1903825	organic acid transmembrane transport	IEP	Neighborhood
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Neighborhood
BP	GO:1905392	plant organ morphogenesis	IEP	Neighborhood
BP	GO:2000038	regulation of stomatal complex development	IEP	Neighborhood
BP	GO:2000122	negative regulation of stomatal complex development	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR011128	G3P_DH_NAD-dep_N	146	247
IPR006109	G3P_DH_NAD-dep_C	274	428

External Links

No external refs found!

AT2G41540 (GPDHC1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation