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Description : pre-40S ribosomal subunit assembly factor (RID3)
Gene families : OG0002482 (Archaeplastida) Phylogenetic Tree(s): OG0002482_tree ,
OG_05_0002778 (LandPlants) Phylogenetic Tree(s): OG_05_0002778_tree ,
OG_06_0002789 (SeedPlants) Phylogenetic Tree(s): OG_06_0002789_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_28842 | |
| Cluster | HCCA: Cluster_37 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GSVIVT01008513001 | No alias | Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
| GSVIVT01014098001 | No alias | Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003756 | protein disulfide isomerase activity | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | Neighborhood |
| MF | GO:0004451 | isocitrate lyase activity | IEP | Neighborhood |
| MF | GO:0004474 | malate synthase activity | IEP | Neighborhood |
| MF | GO:0004525 | ribonuclease III activity | IEP | Neighborhood |
| MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Neighborhood |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Neighborhood |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Neighborhood |
| BP | GO:0006097 | glyoxylate cycle | IEP | Neighborhood |
| BP | GO:0006471 | protein ADP-ribosylation | IEP | Neighborhood |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Neighborhood |
| MF | GO:0016763 | transferase activity, transferring pentosyl groups | IEP | Neighborhood |
| MF | GO:0016833 | oxo-acid-lyase activity | IEP | Neighborhood |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016864 | intramolecular oxidoreductase activity, transposing S-S bonds | IEP | Neighborhood |
| BP | GO:0019915 | lipid storage | IEP | Neighborhood |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Neighborhood |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Neighborhood |
| BP | GO:0046487 | glyoxylate metabolic process | IEP | Neighborhood |
| MF | GO:0046912 | transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | IEP | Neighborhood |
| BP | GO:0051235 | maintenance of location | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Neighborhood |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Neighborhood |
| MF | GO:1901681 | sulfur compound binding | IEP | Neighborhood |
| No external refs found! |