AT2G42200 (AtSPL9, SPL9)

Aliases : AtSPL9, SPL9

Description : squamosa promoter binding protein-like 9

Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree ,
OG_06_0000075 (SeedPlants) Phylogenetic Tree(s): OG_06_0000075_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G42200
Cluster	HCCA: Cluster_229

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00150040	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.SBP...	0.03	Archaeplastida
AMTR_s00019p00235390	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.SBP...	0.06	Archaeplastida
AMTR_s00022p00198330	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.SBP...	0.06	Archaeplastida
AMTR_s00047p00197010	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.SBP...	0.04	Archaeplastida
AMTR_s00106p00142470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.SBP...	0.04	Archaeplastida
AMTR_s00106p00142740	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00106p00144050	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.SBP...	0.05	Archaeplastida
GSVIVT01010496001	No alias	RNA biosynthesis.transcriptional activation.SBP...	0.04	Archaeplastida
GSVIVT01018204001	No alias	RNA biosynthesis.transcriptional activation.SBP...	0.07	Archaeplastida
GSVIVT01018205001	No alias	RNA biosynthesis.transcriptional activation.SBP...	0.03	Archaeplastida
Gb_03921	No alias	transcription factor (SBP)	0.03	Archaeplastida
Gb_15605	No alias	transcription factor (SBP)	0.03	Archaeplastida
Gb_26600	No alias	no hits & (original description: none)	0.03	Archaeplastida
Gb_27198	No alias	transcription factor (SBP)	0.04	Archaeplastida
Gb_38013	No alias	transcription factor (SBP)	0.03	Archaeplastida
Gb_38014	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os01g69830.1	No alias	transcription factor (SBP)	0.04	Archaeplastida
LOC_Os02g04680.1	No alias	transcription factor (SBP)	0.05	Archaeplastida
LOC_Os02g08070.1	No alias	transcription factor (SBP)	0.04	Archaeplastida
LOC_Os06g49010.4	No alias	transcription factor (SBP)	0.03	Archaeplastida
LOC_Os07g32170.1	No alias	transcription factor (SBP)	0.04	Archaeplastida
MA_10435426g0010	No alias	transcription factor (SBP)	0.05	Archaeplastida
MA_22749g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_3179g0020	No alias	transcription factor (SBP)	0.02	Archaeplastida
Mp1g10020.1	No alias	transcription factor (SBP)	0.03	Archaeplastida
Mp1g10030.1	No alias	transcription factor (SBP)	0.03	Archaeplastida
Pp3c16_7490V3.1	No alias	squamosa promoter binding protein-like 2	0.04	Archaeplastida
Pp3c25_8630V3.1	No alias	squamosa promoter binding protein-like 2	0.03	Archaeplastida
Pp3c4_6000V3.1	No alias	squamosa promoter binding protein-like 8	0.02	Archaeplastida
Pp3c5_22750V3.1	No alias	squamosa promoter binding protein-like 8	0.04	Archaeplastida
Solyc02g077920.4.1	No alias	transcription factor (SBP)	0.06	Archaeplastida
Solyc07g062980.4.1	No alias	transcription factor (SBP)	0.03	Archaeplastida
Solyc10g018780.3.1	No alias	transcription factor (SBP)	0.05	Archaeplastida
Solyc10g078700.3.1	No alias	transcription factor (SBP)	0.04	Archaeplastida
Solyc12g038520.3.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e006686_P001	No alias	transcription factor (SBP)	0.03	Archaeplastida
Zm00001e010124_P002	No alias	transcription factor (SBP)	0.03	Archaeplastida
Zm00001e010443_P001	No alias	transcription factor (SBP)	0.04	Archaeplastida
Zm00001e018817_P003	No alias	transcription factor (SBP)	0.04	Archaeplastida
Zm00001e041526_P001	No alias	transcription factor (SBP)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IGI	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048366	leaf development	IDA	Interproscan
BP	GO:0048366	leaf development	IMP	Interproscan
BP	GO:0048653	anther development	IGI	Interproscan
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048831	regulation of shoot system development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0099402	plant organ development	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1900618	regulation of shoot system morphogenesis	None	Extended
BP	GO:1901371	regulation of leaf morphogenesis	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905421	regulation of plant organ morphogenesis	None	Extended
BP	GO:1905428	regulation of plant organ formation	None	Extended
BP	GO:2000024	regulation of leaf development	None	Extended
BP	GO:2000025	regulation of leaf formation	IMP	Interproscan
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Neighborhood
BP	GO:0001676	long-chain fatty acid metabolic process	IEP	Neighborhood
BP	GO:0003002	regionalization	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003697	single-stranded DNA binding	IEP	Neighborhood
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Neighborhood
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004467	long-chain fatty acid-CoA ligase activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005783	endoplasmic reticulum	IEP	Neighborhood
BP	GO:0006261	DNA-dependent DNA replication	IEP	Neighborhood
BP	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins	IEP	Neighborhood
BP	GO:0006633	fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0007005	mitochondrion organization	IEP	Neighborhood
BP	GO:0007049	cell cycle	IEP	Neighborhood
MF	GO:0008134	transcription factor binding	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
BP	GO:0009554	megasporogenesis	IEP	Neighborhood
BP	GO:0009653	anatomical structure morphogenesis	IEP	Neighborhood
BP	GO:0009664	plant-type cell wall organization	IEP	Neighborhood
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Neighborhood
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	Neighborhood
BP	GO:0009719	response to endogenous stimulus	IEP	Neighborhood
BP	GO:0009725	response to hormone	IEP	Neighborhood
BP	GO:0009735	response to cytokinin	IEP	Neighborhood
BP	GO:0009741	response to brassinosteroid	IEP	Neighborhood
BP	GO:0009791	post-embryonic development	IEP	Neighborhood
BP	GO:0009799	specification of symmetry	IEP	Neighborhood
BP	GO:0009806	lignan metabolic process	IEP	Neighborhood
BP	GO:0009807	lignan biosynthetic process	IEP	Neighborhood
BP	GO:0009827	plant-type cell wall modification	IEP	Neighborhood
BP	GO:0009855	determination of bilateral symmetry	IEP	Neighborhood
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	Neighborhood
BP	GO:0009887	animal organ morphogenesis	IEP	Neighborhood
BP	GO:0009888	tissue development	IEP	Neighborhood
BP	GO:0009908	flower development	IEP	Neighborhood
BP	GO:0009909	regulation of flower development	IEP	Neighborhood
BP	GO:0010016	shoot system morphogenesis	IEP	Neighborhood
BP	GO:0010025	wax biosynthetic process	IEP	Neighborhood
BP	GO:0010051	xylem and phloem pattern formation	IEP	Neighborhood
BP	GO:0010075	regulation of meristem growth	IEP	Neighborhood
BP	GO:0010103	stomatal complex morphogenesis	IEP	Neighborhood
BP	GO:0010143	cutin biosynthetic process	IEP	Neighborhood
BP	GO:0010154	fruit development	IEP	Neighborhood
BP	GO:0010166	wax metabolic process	IEP	Neighborhood
BP	GO:0010226	response to lithium ion	IEP	Neighborhood
BP	GO:0010229	inflorescence development	IEP	Neighborhood
BP	GO:0010321	regulation of vegetative phase change	IEP	Neighborhood
BP	GO:0010358	leaf shaping	IEP	Neighborhood
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	IEP	Neighborhood
BP	GO:0014070	response to organic cyclic compound	IEP	Neighborhood
MF	GO:0015645	fatty acid ligase activity	IEP	Neighborhood
MF	GO:0016405	CoA-ligase activity	IEP	Neighborhood
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0016713	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016874	ligase activity	IEP	Neighborhood
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Neighborhood
MF	GO:0016878	acid-thiol ligase activity	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
MF	GO:0019207	kinase regulator activity	IEP	Neighborhood
MF	GO:0019210	kinase inhibitor activity	IEP	Neighborhood
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
BP	GO:0031399	regulation of protein modification process	IEP	Neighborhood
MF	GO:0031957	very long-chain fatty acid-CoA ligase activity	IEP	Neighborhood
BP	GO:0032501	multicellular organismal process	IEP	Neighborhood
BP	GO:0040034	regulation of development, heterochronic	IEP	Neighborhood
BP	GO:0042023	DNA endoreduplication	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
CC	GO:0042645	mitochondrial nucleoid	IEP	Neighborhood
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	Neighborhood
BP	GO:0044786	cell cycle DNA replication	IEP	Neighborhood
MF	GO:0045551	cinnamyl-alcohol dehydrogenase activity	IEP	Neighborhood
BP	GO:0045736	negative regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Neighborhood
MF	GO:0047196	long-chain-alcohol O-fatty-acyltransferase activity	IEP	Neighborhood
BP	GO:0048367	shoot system development	IEP	Neighborhood
BP	GO:0048439	flower morphogenesis	IEP	Neighborhood
BP	GO:0048481	plant ovule development	IEP	Neighborhood
BP	GO:0048506	regulation of timing of meristematic phase transition	IEP	Neighborhood
BP	GO:0048507	meristem development	IEP	Neighborhood
BP	GO:0048509	regulation of meristem development	IEP	Neighborhood
BP	GO:0048510	regulation of timing of transition from vegetative to reproductive phase	IEP	Neighborhood
BP	GO:0048580	regulation of post-embryonic development	IEP	Neighborhood
BP	GO:0048608	reproductive structure development	IEP	Neighborhood
BP	GO:0048731	system development	IEP	Neighborhood
BP	GO:0048869	cellular developmental process	IEP	Neighborhood
BP	GO:0051131	chaperone-mediated protein complex assembly	IEP	Neighborhood
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Neighborhood
BP	GO:0051259	protein complex oligomerization	IEP	Neighborhood
BP	GO:0051260	protein homooligomerization	IEP	Neighborhood
BP	GO:0060284	regulation of cell development	IEP	Neighborhood
MF	GO:0070001	aspartic-type peptidase activity	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
BP	GO:0070407	oxidation-dependent protein catabolic process	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Neighborhood
MF	GO:0080133	midchain alkane hydroxylase activity	IEP	Neighborhood
BP	GO:0090567	reproductive shoot system development	IEP	Neighborhood
BP	GO:0090626	plant epidermis morphogenesis	IEP	Neighborhood
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
BP	GO:1901568	fatty acid derivative metabolic process	IEP	Neighborhood
BP	GO:1901570	fatty acid derivative biosynthetic process	IEP	Neighborhood
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	Neighborhood
BP	GO:1904030	negative regulation of cyclin-dependent protein kinase activity	IEP	Neighborhood
BP	GO:1905393	plant organ formation	IEP	Neighborhood
BP	GO:2000039	regulation of trichome morphogenesis	IEP	Neighborhood
BP	GO:2000241	regulation of reproductive process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	74	147

External Links

No external refs found!

AT2G42200 (AtSPL9, SPL9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation