AT2G43420

Description : 3-beta hydroxysteroid dehydrogenase/isomerase family protein

Gene families : OG0002289 (Archaeplastida) Phylogenetic Tree(s): OG0002289_tree ,
OG_05_0003753 (LandPlants) Phylogenetic Tree(s): OG_05_0003753_tree ,
OG_06_0003530 (SeedPlants) Phylogenetic Tree(s): OG_06_0003530_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G43420
Cluster	HCCA: Cluster_257

Target	Alias	Description	ECC score	Gene Family Method	Actions
AMTR_s00066p00187670	evm_27.TU.AmTr_v1...	Lipid metabolism.phytosterols.phytosterol...	0.04	Archaeplastida
MA_896665g0010	No alias	3-beta hydroxysteroid dehydrogenase	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
CC	GO:0016020	membrane	None	Extended
MF	GO:0016229	steroid dehydrogenase activity	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
CC	GO:0030054	cell junction	None	Extended
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000030	mannosyltransferase activity	IEP	Neighborhood
MF	GO:0000033	alpha-1,3-mannosyltransferase activity	IEP	Neighborhood
BP	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation	IEP	Neighborhood
BP	GO:0002831	regulation of response to biotic stimulus	IEP	Neighborhood
MF	GO:0003678	DNA helicase activity	IEP	Neighborhood
MF	GO:0003684	damaged DNA binding	IEP	Neighborhood
MF	GO:0003923	GPI-anchor transamidase activity	IEP	Neighborhood
MF	GO:0004518	nuclease activity	IEP	Neighborhood
MF	GO:0004814	arginine-tRNA ligase activity	IEP	Neighborhood
MF	GO:0004843	thiol-dependent ubiquitin-specific protease activity	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
CC	GO:0005768	endosome	IEP	Neighborhood
CC	GO:0005783	endoplasmic reticulum	IEP	Neighborhood
CC	GO:0005794	Golgi apparatus	IEP	Neighborhood
CC	GO:0005802	trans-Golgi network	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006259	DNA metabolic process	IEP	Neighborhood
BP	GO:0006281	DNA repair	IEP	Neighborhood
BP	GO:0006284	base-excision repair	IEP	Neighborhood
BP	GO:0006310	DNA recombination	IEP	Neighborhood
BP	GO:0006396	RNA processing	IEP	Neighborhood
BP	GO:0006420	arginyl-tRNA aminoacylation	IEP	Neighborhood
BP	GO:0006605	protein targeting	IEP	Neighborhood
BP	GO:0006606	protein import into nucleus	IEP	Neighborhood
BP	GO:0006625	protein targeting to peroxisome	IEP	Neighborhood
BP	GO:0006635	fatty acid beta-oxidation	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006839	mitochondrial transport	IEP	Neighborhood
BP	GO:0006886	intracellular protein transport	IEP	Neighborhood
BP	GO:0006913	nucleocytoplasmic transport	IEP	Neighborhood
BP	GO:0006996	organelle organization	IEP	Neighborhood
BP	GO:0007031	peroxisome organization	IEP	Neighborhood
BP	GO:0008104	protein localization	IEP	Neighborhood
MF	GO:0008373	sialyltransferase activity	IEP	Neighborhood
BP	GO:0008380	RNA splicing	IEP	Neighborhood
MF	GO:0008408	3'-5' exonuclease activity	IEP	Neighborhood
BP	GO:0009062	fatty acid catabolic process	IEP	Neighborhood
CC	GO:0009527	plastid outer membrane	IEP	Neighborhood
CC	GO:0009707	chloroplast outer membrane	IEP	Neighborhood
BP	GO:0009954	proximal/distal pattern formation	IEP	Neighborhood
BP	GO:0009955	adaxial/abaxial pattern specification	IEP	Neighborhood
BP	GO:0010305	leaf vascular tissue pattern formation	IEP	Neighborhood
BP	GO:0010589	leaf proximal/distal pattern formation	IEP	Neighborhood
BP	GO:0015031	protein transport	IEP	Neighborhood
BP	GO:0015833	peptide transport	IEP	Neighborhood
BP	GO:0015919	peroxisomal membrane transport	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
BP	GO:0016042	lipid catabolic process	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
BP	GO:0016558	protein import into peroxisome matrix	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
BP	GO:0017038	protein import	IEP	Neighborhood
BP	GO:0019395	fatty acid oxidation	IEP	Neighborhood
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Neighborhood
CC	GO:0019898	extrinsic component of membrane	IEP	Neighborhood
BP	GO:0030258	lipid modification	IEP	Neighborhood
CC	GO:0031090	organelle membrane	IEP	Neighborhood
CC	GO:0031410	cytoplasmic vesicle	IEP	Neighborhood
CC	GO:0031982	vesicle	IEP	Neighborhood
CC	GO:0031984	organelle subcompartment	IEP	Neighborhood
BP	GO:0032101	regulation of response to external stimulus	IEP	Neighborhood
MF	GO:0032182	ubiquitin-like protein binding	IEP	Neighborhood
BP	GO:0033036	macromolecule localization	IEP	Neighborhood
BP	GO:0033365	protein localization to organelle	IEP	Neighborhood
BP	GO:0034440	lipid oxidation	IEP	Neighborhood
BP	GO:0034504	protein localization to nucleus	IEP	Neighborhood
BP	GO:0034613	cellular protein localization	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0035195	gene silencing by miRNA	IEP	Neighborhood
MF	GO:0035197	siRNA binding	IEP	Neighborhood
MF	GO:0035198	miRNA binding	IEP	Neighborhood
MF	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	IEP	Neighborhood
BP	GO:0042886	amide transport	IEP	Neighborhood
MF	GO:0043130	ubiquitin binding	IEP	Neighborhood
CC	GO:0043226	organelle	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043229	intracellular organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043574	peroxisomal transport	IEP	Neighborhood
BP	GO:0044242	cellular lipid catabolic process	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044431	Golgi apparatus part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
BP	GO:0044743	protein transmembrane import into intracellular organelle	IEP	Neighborhood
MF	GO:0044877	protein-containing complex binding	IEP	Neighborhood
BP	GO:0045184	establishment of protein localization	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
BP	GO:0046907	intracellular transport	IEP	Neighborhood
BP	GO:0048468	cell development	IEP	Neighborhood
BP	GO:0048830	adventitious root development	IEP	Neighborhood
BP	GO:0048864	stem cell development	IEP	Neighborhood
BP	GO:0051169	nuclear transport	IEP	Neighborhood
BP	GO:0051170	import into nucleus	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0051641	cellular localization	IEP	Neighborhood
BP	GO:0051649	establishment of localization in cell	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
MF	GO:0061980	regulatory RNA binding	IEP	Neighborhood
BP	GO:0065002	intracellular protein transmembrane transport	IEP	Neighborhood
BP	GO:0070417	cellular response to cold	IEP	Neighborhood
MF	GO:0070628	proteasome binding	IEP	Neighborhood
BP	GO:0070727	cellular macromolecule localization	IEP	Neighborhood
BP	GO:0071806	protein transmembrane transport	IEP	Neighborhood
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	Neighborhood
BP	GO:0072594	establishment of protein localization to organelle	IEP	Neighborhood
BP	GO:0072662	protein localization to peroxisome	IEP	Neighborhood
BP	GO:0072663	establishment of protein localization to peroxisome	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
CC	GO:0097708	intracellular vesicle	IEP	Neighborhood
CC	GO:0098588	bounding membrane of organelle	IEP	Neighborhood
CC	GO:0098791	Golgi subcompartment	IEP	Neighborhood
CC	GO:0098805	whole membrane	IEP	Neighborhood
MF	GO:0101005	ubiquitinyl hydrolase activity	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood
BP	GO:1900150	regulation of defense response to fungus	IEP	Neighborhood
BP	GO:2000072	regulation of defense response to fungus, incompatible interaction	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002225	3Beta_OHSteriod_DH/Estase	16	287
IPR003388	Reticulon	379	534

External Links

No external refs found!

AT2G43420

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation