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  5. Gb_31864

Gb_31864


Description : component VPS2/CHMP2 of ESCRT-III complex


Gene families : OG0001089 (Archaeplastida) Phylogenetic Tree(s): OG0001089_tree ,
OG_05_0004324 (LandPlants) Phylogenetic Tree(s): OG_05_0004324_tree ,
OG_06_0004747 (SeedPlants) Phylogenetic Tree(s): OG_06_0004747_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_31864
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Cre04.g213450 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 Archaeplastida
Cre17.g735400 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 Archaeplastida
LOC_Os10g33660.1 No alias component VPS2/CHMP2 of ESCRT-III complex 0.02 Archaeplastida
Mp8g06820.1 No alias component VPS2/CHMP2 of ESCRT-III complex 0.02 Archaeplastida
Solyc12g009060.2.1 No alias component VPS2/CHMP2 of ESCRT-III complex 0.03 Archaeplastida
Zm00001e009370_P001 No alias component VPS2/CHMP2 of ESCRT-III complex 0.02 Archaeplastida
Zm00001e033163_P001 No alias component VPS2/CHMP2 of ESCRT-III complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004725 protein tyrosine phosphatase activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006470 protein dephosphorylation IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005024 Snf7_fam 17 195
No external refs found!