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  5. Gb_32044

Gb_32044


Description : Endoribonuclease Dicer homolog 2 OS=Arabidopsis thaliana (sp|q3ebc8|dcl2_arath : 1051.0)


Gene families : OG0000221 (Archaeplastida) Phylogenetic Tree(s): OG0000221_tree ,
OG_05_0000940 (LandPlants) Phylogenetic Tree(s): OG_05_0000940_tree ,
OG_06_0002089 (SeedPlants) Phylogenetic Tree(s): OG_06_0002089_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_32044
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Pp3c2_15900V3.1 No alias dicer-like 1 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004525 ribonuclease III activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
MF GO:0004451 isocitrate lyase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001650 Helicase_C 408 525
IPR011545 DEAD/DEAH_box_helicase_dom 69 224
IPR005034 Dicer_dimerisation_dom 595 677
IPR014720 dsRBD_dom 1395 1458
IPR000999 RNase_III_dom 1063 1177
IPR000999 RNase_III_dom 1254 1368
IPR003100 PAZ_dom 897 1020
No external refs found!