Gb_32666


Description : DNA ligase 4 OS=Arabidopsis thaliana (sp|q9ll84|dnli4_arath : 154.0)


Gene families : OG0003002 (Archaeplastida) Phylogenetic Tree(s): OG0003002_tree ,
OG_05_0003553 (LandPlants) Phylogenetic Tree(s): OG_05_0003553_tree ,
OG_06_0004083 (SeedPlants) Phylogenetic Tree(s): OG_06_0004083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_32666
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
MA_10205894g0010 No alias DNA ligase 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003910 DNA ligase (ATP) activity IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
BP GO:0006310 DNA recombination IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
MF GO:0004620 phospholipase activity IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
MF GO:0050290 sphingomyelin phosphodiesterase D activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR012308 DNA_ligase_ATP-dep_N 41 118
No external refs found!