1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_34121

Gb_34121


Description : alpha-class expansin


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0000041 (SeedPlants) Phylogenetic Tree(s): OG_06_0000041_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_34121
Cluster HCCA: Cluster_308

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00270650 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AMTR_s00010p00264980 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AMTR_s00022p00153780 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
AT1G26770 ATEXPA10,... expansin A10 0.02 Archaeplastida
AT1G69530 ATEXPA1, EXP1,... expansin A1 0.02 Archaeplastida
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.04 Archaeplastida
AT2G40610 EXPA8, ATHEXP... expansin A8 0.03 Archaeplastida
AT4G01630 ATHEXP ALPHA... expansin A17 0.03 Archaeplastida
LOC_Os03g06000.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g06020.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os05g19600.1 No alias alpha-class expansin 0.02 Archaeplastida
MA_100868g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_12056g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_14588g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_18265g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_19117g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_3618g0010 No alias Expansin-A15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_86877g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_915221g0010 No alias alpha-class expansin 0.03 Archaeplastida
Mp1g26350.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g06900.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g09650.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g09760.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g09770.1 No alias alpha-class expansin 0.02 Archaeplastida
Pp3c13_20360V3.1 No alias expansin A9 0.03 Archaeplastida
Pp3c24_15400V3.1 No alias expansin A15 0.02 Archaeplastida
Smo409954 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo78615 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo90332 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Solyc10g084780.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004714_P001 No alias alpha-class expansin 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004451 isocitrate lyase activity IEP Neighborhood
MF GO:0004474 malate synthase activity IEP Neighborhood
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
BP GO:0006097 glyoxylate cycle IEP Neighborhood
BP GO:0006471 protein ADP-ribosylation IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019319 hexose biosynthetic process IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0046364 monosaccharide biosynthetic process IEP Neighborhood
BP GO:0046487 glyoxylate metabolic process IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 180 267
IPR007117 Expansin_CBD 278 355
No external refs found!