AT3G01220 (ATHB20, HB20)


Aliases : ATHB20, HB20

Description : homeobox protein 20


Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree ,
OG_05_0000061 (LandPlants) Phylogenetic Tree(s): OG_05_0000061_tree ,
OG_06_0000101 (SeedPlants) Phylogenetic Tree(s): OG_06_0000101_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G01220
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00267430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AMTR_s00010p00253290 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AMTR_s00040p00235500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AMTR_s00078p00085160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AT2G46680 HB-7, ATHB-7, ATHB7 homeobox 7 0.05 Archaeplastida
AT3G01470 ATHB1, ATHB-1,... homeobox 1 0.03 Archaeplastida
AT4G36740 ATHB40, HB40, HB-5 homeobox protein 40 0.03 Archaeplastida
AT5G53980 ATHB52, HB52 homeobox protein 52 0.08 Archaeplastida
AT5G66700 ATHB53, HB53, HB-8 homeobox 53 0.01 Archaeplastida
GSVIVT01011377001 No alias RNA biosynthesis.transcriptional activation.HB... 0.01 Archaeplastida
GSVIVT01019012001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01020033001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
Gb_04698 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Gb_20878 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os03g07450.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
LOC_Os03g08960.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
LOC_Os03g10210.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
LOC_Os04g45810.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os07g39320.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os08g32080.1 No alias transcription factor (HD-ZIP I/II) 0.06 Archaeplastida
LOC_Os08g32085.1 No alias transcription factor (HD-ZIP I/II) 0.06 Archaeplastida
LOC_Os09g35910.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
LOC_Os10g23090.1 No alias transcription factor (HD-ZIP I/II) 0.07 Archaeplastida
LOC_Os10g26500.1 No alias transcription factor (HD-ZIP I/II) 0.08 Archaeplastida
MA_10428916g0010 No alias transcription factor (HD-ZIP I/II) 0.06 Archaeplastida
MA_128g0010 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
MA_130615g0020 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
MA_19453g0050 No alias Homeobox-leucine zipper protein HAT5 OS=Arabidopsis... 0.04 Archaeplastida
MA_9241385g0010 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Mp3g02320.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
Pp3c11_23440V3.1 No alias homeobox 1 0.04 Archaeplastida
Pp3c17_18190V3.1 No alias homeobox protein 16 0.04 Archaeplastida
Pp3c1_36940V3.1 No alias homeobox protein 16 0.04 Archaeplastida
Pp3c1_37070V3.1 No alias homeobox protein 16 0.07 Archaeplastida
Pp3c6_2730V3.1 No alias Homeobox-leucine zipper protein family 0.05 Archaeplastida
Pp3c7_2100V3.1 No alias Homeobox-leucine zipper protein family 0.06 Archaeplastida
Solyc01g010600.4.1 No alias transcription factor (HD-ZIP I/II) 0.06 Archaeplastida
Solyc02g067410.2.1 No alias transcription factor (HD-ZIP I/II) 0.13 Archaeplastida
Solyc02g077590.1.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
Solyc02g086930.4.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
Solyc02g087840.3.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
Solyc03g082550.3.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
Solyc06g053220.3.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
Solyc07g062790.1.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
Solyc09g008810.3.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Zm00001e004824_P001 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
Zm00001e012829_P001 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
Zm00001e038901_P001 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport RCA Interproscan
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
BP GO:0009733 response to auxin IEP Interproscan
Type GO Term Name Evidence Source
MF GO:0004163 diphosphomevalonate decarboxylase activity IEP Neighborhood
MF GO:0004452 isopentenyl-diphosphate delta-isomerase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004737 pyruvate decarboxylase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0005513 detection of calcium ion IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006084 acetyl-CoA metabolic process IEP Neighborhood
BP GO:0006085 acetyl-CoA biosynthetic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006637 acyl-CoA metabolic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
MF GO:0008142 oxysterol binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
BP GO:0009267 cellular response to starvation IEP Neighborhood
BP GO:0009736 cytokinin-activated signaling pathway IEP Neighborhood
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP Neighborhood
BP GO:0009825 multidimensional cell growth IEP Neighborhood
CC GO:0009986 cell surface IEP Neighborhood
BP GO:0009991 response to extracellular stimulus IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010043 response to zinc ion IEP Neighborhood
BP GO:0010106 cellular response to iron ion starvation IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
MF GO:0010294 abscisic acid glucosyltransferase activity IEP Neighborhood
BP GO:0010306 rhamnogalacturonan II biosynthetic process IEP Neighborhood
BP GO:0010359 regulation of anion channel activity IEP Neighborhood
BP GO:0010396 rhamnogalacturonan II metabolic process IEP Neighborhood
MF GO:0015105 arsenite transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015700 arsenite transport IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
BP GO:0016128 phytosteroid metabolic process IEP Neighborhood
BP GO:0016129 phytosteroid biosynthetic process IEP Neighborhood
BP GO:0016131 brassinosteroid metabolic process IEP Neighborhood
BP GO:0016132 brassinosteroid biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Neighborhood
BP GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0022898 regulation of transmembrane transporter activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0031667 response to nutrient levels IEP Neighborhood
BP GO:0031668 cellular response to extracellular stimulus IEP Neighborhood
BP GO:0031669 cellular response to nutrient levels IEP Neighborhood
BP GO:0032409 regulation of transporter activity IEP Neighborhood
BP GO:0032412 regulation of ion transmembrane transporter activity IEP Neighborhood
BP GO:0032879 regulation of localization IEP Neighborhood
MF GO:0032934 sterol binding IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034762 regulation of transmembrane transport IEP Neighborhood
BP GO:0034765 regulation of ion transmembrane transport IEP Neighborhood
MF GO:0035252 UDP-xylosyltransferase activity IEP Neighborhood
BP GO:0035383 thioester metabolic process IEP Neighborhood
BP GO:0035384 thioester biosynthetic process IEP Neighborhood
BP GO:0042594 response to starvation IEP Neighborhood
BP GO:0043269 regulation of ion transport IEP Neighborhood
BP GO:0044070 regulation of anion transport IEP Neighborhood
MF GO:0046910 pectinesterase inhibitor activity IEP Neighborhood
BP GO:0051049 regulation of transport IEP Neighborhood
BP GO:0051592 response to calcium ion IEP Neighborhood
BP GO:0052325 cell wall pectin biosynthetic process IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071368 cellular response to cytokinin stimulus IEP Neighborhood
BP GO:0071496 cellular response to external stimulus IEP Neighborhood
BP GO:0071616 acyl-CoA biosynthetic process IEP Neighborhood
BP GO:0080113 regulation of seed growth IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1903959 regulation of anion transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 142 182
IPR001356 Homeobox_dom 88 140
No external refs found!