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  5. Gb_41091

Gb_41091


Description : p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL)


Gene families : OG0000179 (Archaeplastida) Phylogenetic Tree(s): OG0000179_tree ,
OG_05_0001067 (LandPlants) Phylogenetic Tree(s): OG_05_0001067_tree ,
OG_06_0001032 (SeedPlants) Phylogenetic Tree(s): OG_06_0001032_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_41091
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00239750 evm_27.TU.AmTr_v1... Phytohormones.jasmonic acid.synthesis.OPC-8:CoA synthetase 0.02 Archaeplastida
AMTR_s00019p00213640 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
AMTR_s00025p00217510 evm_27.TU.AmTr_v1... 4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00025p00217630 evm_27.TU.AmTr_v1... 4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00048p00101790 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
AT1G20500 No alias AMP-dependent synthetase and ligase family protein 0.04 Archaeplastida
AT1G20510 OPCL1 OPC-8:0 CoA ligase1 0.03 Archaeplastida
AT1G51680 4CL1, AT4CL1, 4CL.1 4-coumarate:CoA ligase 1 0.05 Archaeplastida
AT1G62940 ACOS5 acyl-CoA synthetase 5 0.04 Archaeplastida
AT1G65060 4CL3 4-coumarate:CoA ligase 3 0.1 Archaeplastida
AT5G38120 4CL8 AMP-dependent synthetase and ligase family protein 0.03 Archaeplastida
GSVIVT01010497001 No alias Cell wall.sporopollenin.synthesis.ACS5 acyl-CoA synthetase 0.04 Archaeplastida
GSVIVT01024400001 No alias 4-coumarate--CoA ligase 2 OS=Glycine max 0.13 Archaeplastida
GSVIVT01029182001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
Gb_19726 No alias 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g67540.1 No alias 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os02g08100.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.06 Archaeplastida
LOC_Os02g46970.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.05 Archaeplastida
LOC_Os03g04000.1 No alias OPC-8:CoA synthetase 0.04 Archaeplastida
LOC_Os04g24530.1 No alias acyl-CoA synthetase (ACS5) 0.04 Archaeplastida
LOC_Os06g44620.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
LOC_Os08g14760.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
LOC_Os08g34790.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.06 Archaeplastida
MA_109119g0010 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.09 Archaeplastida
MA_56692g0010 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 Archaeplastida
MA_8946476g0010 No alias acyl-CoA synthetase (ACS5) 0.03 Archaeplastida
Mp1g11670.1 No alias acyl-CoA synthetase (ACS5) 0.02 Archaeplastida
Mp5g01200.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.09 Archaeplastida
Mp5g07170.1 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c13_8490V3.1 No alias AMP-dependent synthetase and ligase family protein 0.03 Archaeplastida
Pp3c18_6360V3.1 No alias 4-coumarate:CoA ligase 3 0.06 Archaeplastida
Pp3c19_13170V3.1 No alias 4-coumarate:CoA ligase 3 0.02 Archaeplastida
Pp3c22_15350V3.1 No alias 4-coumarate:CoA ligase 3 0.08 Archaeplastida
Pp3c3_37980V3.1 No alias acyl-CoA synthetase 5 0.03 Archaeplastida
Smo177393 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
Smo177466 No alias 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.04 Archaeplastida
Solyc02g088710.3.1 No alias acyl-CoA synthetase (ACS5) 0.03 Archaeplastida
Solyc03g097030.3.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.11 Archaeplastida
Solyc03g111170.3.1 No alias 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc03g117870.3.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.06 Archaeplastida
Zm00001e002498_P003 No alias 4-coumarate--CoA ligase-like 3 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e004865_P001 No alias 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e008138_P001 No alias acyl-CoA synthetase (ACS5) 0.06 Archaeplastida
Zm00001e013798_P002 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
Zm00001e016374_P001 No alias acyl-CoA synthetase (ACS5) 0.05 Archaeplastida
Zm00001e023286_P002 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003997 acyl-CoA oxidase activity IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006817 phosphate ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 499 574
IPR000873 AMP-dep_Synth/Lig 80 490
No external refs found!