Neighborhood MF GO:0004448 isocitrate dehydrogenase activity IEP Neighborhood MF GO:0004449 isocitrate dehydrogenase (NAD+) activity IEP Neighborhood MF GO:0004496 mevalonate kinase activity IEP Neighborhood MF GO:0004550 nucleoside diphosphate kinase activity IEP Neighborhood MF GO:0004615 phosphomannomutase activity IEP Neighborhood MF GO:0004634 phosphopyruvate hydratase activity IEP Neighborhood MF GO:0004659 prenyltransferase activity IEP Neighborhood MF GO:0004738 pyruvate dehydrogenase activity IEP Neighborhood MF GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity IEP Neighborhood MF GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity IEP Neighborhood MF GO:0004743 pyruvate kinase activity IEP Neighborhood MF GO:0004774 succinate-CoA ligase activity IEP Neighborhood MF GO:0004776 succinate-CoA ligase (GDP-forming) activity IEP Neighborhood MF GO:0004791 thioredoxin-disulfide reductase activity IEP Neighborhood MF GO:0005215 transporter activity IEP Neighborhood MF GO:0005216 ion channel activity IEP Neighborhood MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood MF GO:0005253 anion channel activity IEP Neighborhood MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Neighborhood MF GO:0005347 ATP transmembrane transporter activity IEP Neighborhood MF GO:0005471 ATP:ADP antiporter activity IEP Neighborhood MF GO:0005507 copper ion binding IEP Neighborhood BP GO:0005513 detection of calcium ion IEP Neighborhood MF GO:0005524 ATP binding IEP Neighborhood MF GO:0005525 GTP binding IEP Neighborhood CC GO:0005618 cell wall IEP Neighborhood CC GO:0005730 nucleolus IEP Neighborhood CC GO:0005737 cytoplasm IEP Neighborhood CC GO:0005740 mitochondrial envelope IEP Neighborhood CC GO:0005741 mitochondrial outer membrane IEP Neighborhood CC GO:0005743 mitochondrial inner membrane IEP Neighborhood CC GO:0005746 mitochondrial respiratory chain IEP Neighborhood CC GO:0005747 mitochondrial respiratory chain complex I IEP Neighborhood CC GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) IEP Neighborhood CC GO:0005750 mitochondrial respiratory chain complex III IEP Neighborhood CC GO:0005753 mitochondrial proton-transporting ATP synthase complex IEP Neighborhood CC GO:0005758 mitochondrial intermembrane space IEP Neighborhood CC GO:0005759 mitochondrial matrix IEP Neighborhood CC GO:0005773 vacuole IEP Neighborhood CC GO:0005774 vacuolar membrane IEP Neighborhood CC GO:0005783 endoplasmic reticulum IEP Neighborhood CC GO:0005794 Golgi apparatus IEP Neighborhood CC GO:0005829 cytosol IEP Neighborhood CC GO:0005886 plasma membrane IEP Neighborhood CC GO:0005911 cell-cell junction IEP Neighborhood CC GO:0005938 cell cortex IEP Neighborhood CC GO:0005960 glycine cleavage complex IEP Neighborhood BP GO:0005975 carbohydrate metabolic process IEP Neighborhood BP GO:0005996 monosaccharide metabolic process IEP Neighborhood BP GO:0006006 glucose metabolic process IEP Neighborhood BP GO:0006007 glucose catabolic process IEP Neighborhood BP GO:0006013 mannose metabolic process IEP Neighborhood BP GO:0006065 UDP-glucuronate biosynthetic process IEP Neighborhood BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood BP GO:0006082 organic acid metabolic process IEP Neighborhood BP GO:0006084 acetyl-CoA metabolic process IEP Neighborhood BP GO:0006085 acetyl-CoA biosynthetic process IEP Neighborhood BP GO:0006089 lactate metabolic process IEP Neighborhood BP GO:0006090 pyruvate metabolic process IEP Neighborhood BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood BP GO:0006094 gluconeogenesis IEP Neighborhood BP GO:0006096 glycolytic process IEP Neighborhood BP GO:0006098 pentose-phosphate shunt IEP Neighborhood BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood BP GO:0006101 citrate metabolic process IEP Neighborhood BP GO:0006102 isocitrate metabolic process IEP Neighborhood BP GO:0006120 mitochondrial electron transport, NADH to ubiquinone IEP Neighborhood BP GO:0006121 mitochondrial electron transport, succinate to ubiquinone IEP Neighborhood BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood BP GO:0006148 inosine catabolic process IEP Neighborhood BP GO:0006152 purine nucleoside catabolic process IEP Neighborhood BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood BP GO:0006164 purine nucleotide biosynthetic process IEP Neighborhood BP GO:0006165 nucleoside diphosphate phosphorylation IEP Neighborhood BP GO:0006166 purine ribonucleoside salvage IEP Neighborhood BP GO:0006169 adenosine salvage IEP Neighborhood BP GO:0006497 protein lipidation IEP Neighborhood BP GO:0006498 N-terminal protein lipidation IEP Neighborhood BP GO:0006499 N-terminal protein myristoylation IEP Neighborhood BP GO:0006508 proteolysis IEP Neighborhood BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood BP GO:0006595 polyamine metabolic process IEP Neighborhood BP GO:0006598 polyamine catabolic process IEP Neighborhood BP GO:0006637 acyl-CoA metabolic process IEP Neighborhood BP GO:0006694 steroid biosynthetic process IEP Neighborhood BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood BP GO:0006732 coenzyme metabolic process IEP Neighborhood BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Neighborhood BP GO:0006739 NADP metabolic process IEP Neighborhood BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood BP GO:0006754 ATP biosynthetic process IEP Neighborhood BP Zm00001e001257_P001 details

Zm00001e001257_P001


Description : component PnsL1 of NDH lumen subcomplex L


Gene families : OG0003592 (Archaeplastida) Phylogenetic Tree(s): OG0003592_tree ,
OG_05_0003587 (LandPlants) Phylogenetic Tree(s): OG_05_0003587_tree ,
OG_06_0012171 (SeedPlants) Phylogenetic Tree(s): OG_06_0012171_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001257_P001
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00145p00071320 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
AT2G39470 PPL2 PsbP-like protein 2 0.09 Archaeplastida
AT3G55330 PPL1 PsbP-like protein 1 0.05 Archaeplastida
Cre12.g509050 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 Archaeplastida
GSVIVT01016616001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.06 Archaeplastida
GSVIVT01016618001 No alias Photosynthesis.photophosphorylation.photosystem... 0.05 Archaeplastida
LOC_Os03g17174.1 No alias component PnsL1 of NDH lumen subcomplex L 0.04 Archaeplastida
LOC_Os08g25900.1 No alias PPL1 protein involved in PS-II assembly 0.03 Archaeplastida
MA_418221g0010 No alias PsbP-like protein 1, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida
Mp2g21180.1 No alias PPL1 protein involved in PS-II assembly 0.05 Archaeplastida
Pp3c2_13270V3.1 No alias PsbP-like protein 1 0.05 Archaeplastida
Smo139888 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
Smo164192 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
Solyc03g114930.3.1 No alias PPL1 protein involved in PS-II assembly 0.04 Archaeplastida
Solyc10g054420.2.1 No alias component PnsL1 of NDH lumen subcomplex L 0.11 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
GO:0006757
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004089 carbonate dehydratase activity IEP Neighborhood
MF GO:0004470 malic enzyme activity IEP Neighborhood
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004779 sulfate adenylyltransferase activity IEP Neighborhood
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Neighborhood
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006817 phosphate ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016615 malate dehydrogenase activity IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002683 PsbP 88 236
No external refs found!