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  5. AT3G11980

AT3G11980 (MS2, FAR2)


Aliases : MS2, FAR2

Description : Jojoba acyl CoA reductase-related male sterility protein


Gene families : OG0000424 (Archaeplastida) Phylogenetic Tree(s): OG0000424_tree ,
OG_05_0000401 (LandPlants) Phylogenetic Tree(s): OG_05_0000401_tree ,
OG_06_0003901 (SeedPlants) Phylogenetic Tree(s): OG_06_0003901_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G11980
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00161230 evm_27.TU.AmTr_v1... Cell wall.cutin and suberin.cuticular lipid... 0.02 Archaeplastida
AMTR_s00133p00107670 evm_27.TU.AmTr_v1... Cell wall.cutin and suberin.cuticular lipid... 0.12 Archaeplastida
AT3G44540 FAR4 fatty acid reductase 4 0.06 Archaeplastida
AT3G44550 FAR5 fatty acid reductase 5 0.04 Archaeplastida
AT3G44560 FAR8 fatty acid reductase 8 0.04 Archaeplastida
AT5G22420 FAR7 fatty acid reductase 7 0.05 Archaeplastida
GSVIVT01013560001 No alias Cell wall.cutin and suberin.cuticular lipid... 0.03 Archaeplastida
GSVIVT01013561001 No alias Cell wall.cutin and suberin.cuticular lipid... 0.03 Archaeplastida
GSVIVT01013562001 No alias Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01033433001 No alias Cell wall.cutin and suberin.cuticular lipid... 0.11 Archaeplastida
GSVIVT01036171001 No alias Cell wall.cutin and suberin.cuticular lipid... 0.03 Archaeplastida
Gb_12942 No alias acyl CoA reductase 0.03 Archaeplastida
Gb_18690 No alias fatty acyl-CoA reductase (MS2). acyl CoA reductase 0.07 Archaeplastida
Gb_33594 No alias acyl CoA reductase 0.05 Archaeplastida
Gb_38743 No alias acyl CoA reductase 0.03 Archaeplastida
LOC_Os03g07140.1 No alias fatty acyl-CoA reductase (MS2). acyl CoA reductase 0.13 Archaeplastida
LOC_Os04g28520.1 No alias acyl CoA reductase 0.03 Archaeplastida
LOC_Os04g28620.1 No alias acyl CoA reductase 0.03 Archaeplastida
LOC_Os07g30600.1 No alias acyl CoA reductase 0.03 Archaeplastida
MA_10122399g0010 No alias acyl CoA reductase 0.05 Archaeplastida
MA_101858g0010 No alias Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10428159g0010 No alias acyl CoA reductase 0.02 Archaeplastida
MA_10428856g0010 No alias Probable fatty acyl-CoA reductase 4 OS=Arabidopsis... 0.03 Archaeplastida
MA_10431907g0010 No alias acyl CoA reductase 0.03 Archaeplastida
MA_10433039g0010 No alias Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10433039g0030 No alias Probable fatty acyl-CoA reductase 4 OS=Arabidopsis... 0.04 Archaeplastida
MA_182956g0010 No alias acyl CoA reductase 0.02 Archaeplastida
MA_2909225g0010 No alias Probable fatty acyl-CoA reductase 4 OS=Arabidopsis... 0.02 Archaeplastida
MA_428306g0010 No alias acyl CoA reductase 0.05 Archaeplastida
MA_438940g0010 No alias Probable fatty acyl-CoA reductase 4 OS=Arabidopsis... 0.03 Archaeplastida
MA_55232g0010 No alias acyl CoA reductase 0.03 Archaeplastida
MA_62046g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_672797g0010 No alias Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_8606026g0010 No alias acyl CoA reductase 0.02 Archaeplastida
MA_95531g0010 No alias acyl CoA reductase 0.03 Archaeplastida
MA_9850928g0010 No alias Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c11_22660V3.1 No alias Jojoba acyl CoA reductase-related male sterility protein 0.02 Archaeplastida
Pp3c7_2660V3.1 No alias Jojoba acyl CoA reductase-related male sterility protein 0.06 Archaeplastida
Smo270198 No alias Cell wall.cutin and suberin.cuticular lipid... 0.02 Archaeplastida
Solyc01g104200.4.1 No alias acyl CoA reductase 0.04 Archaeplastida
Solyc03g051960.4.1 No alias fatty acyl-CoA reductase (MS2). acyl CoA reductase 0.16 Archaeplastida
Solyc06g074390.3.1 No alias acyl CoA reductase 0.03 Archaeplastida
Solyc06g074410.4.1 No alias acyl CoA reductase 0.04 Archaeplastida
Solyc09g005940.4.1 No alias acyl CoA reductase 0.03 Archaeplastida
Solyc09g009565.1.1 No alias Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Solyc09g009580.4.1 No alias acyl CoA reductase 0.11 Archaeplastida
Solyc11g067170.3.1 No alias acyl CoA reductase 0.06 Archaeplastida
Solyc11g067180.2.1 No alias acyl CoA reductase 0.04 Archaeplastida
Solyc11g067190.3.1 No alias acyl CoA reductase 0.03 Archaeplastida
Zm00001e022068_P003 No alias acyl CoA reductase 0.06 Archaeplastida
Zm00001e024547_P004 No alias acyl CoA reductase 0.04 Archaeplastida
Zm00001e033615_P003 No alias acyl CoA reductase 0.01 Archaeplastida
Zm00001e038924_P001 No alias acyl CoA reductase 0.11 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0009556 microsporogenesis IMP Interproscan
BP GO:0010584 pollen exine formation IMP Interproscan
BP GO:0010584 pollen exine formation RCA Interproscan
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor ISS Interproscan
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004044 amidophosphoribosyltransferase activity IEP Neighborhood
MF GO:0004467 long-chain fatty acid-CoA ligase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005788 endoplasmic reticulum lumen IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
BP GO:0008216 spermidine metabolic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009113 purine nucleobase biosynthetic process IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
BP GO:0009698 phenylpropanoid metabolic process IEP Neighborhood
BP GO:0009699 phenylpropanoid biosynthetic process IEP Neighborhood
BP GO:0009820 alkaloid metabolic process IEP Neighborhood
BP GO:0009821 alkaloid biosynthetic process IEP Neighborhood
BP GO:0009943 adaxial/abaxial axis specification IEP Neighborhood
BP GO:0010152 pollen maturation IEP Neighborhood
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEP Neighborhood
MF GO:0015271 outward rectifier potassium channel activity IEP Neighborhood
MF GO:0015645 fatty acid ligase activity IEP Neighborhood
MF GO:0016207 4-coumarate-CoA ligase activity IEP Neighborhood
MF GO:0016621 cinnamoyl-CoA reductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0018685 alkane 1-monooxygenase activity IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0030638 polyketide metabolic process IEP Neighborhood
BP GO:0030639 polyketide biosynthetic process IEP Neighborhood
MF GO:0031956 medium-chain fatty acid-CoA ligase activity IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0035337 fatty-acyl-CoA metabolic process IEP Neighborhood
BP GO:0035384 thioester biosynthetic process IEP Neighborhood
BP GO:0035445 borate transmembrane transport IEP Neighborhood
BP GO:0042335 cuticle development IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0046112 nucleobase biosynthetic process IEP Neighborhood
BP GO:0046713 borate transport IEP Neighborhood
MF GO:0046715 active borate transmembrane transporter activity IEP Neighborhood
BP GO:0046949 fatty-acyl-CoA biosynthetic process IEP Neighborhood
BP GO:0048229 gametophyte development IEP Neighborhood
BP GO:0048658 anther wall tapetum development IEP Neighborhood
BP GO:0048859 formation of anatomical boundary IEP Neighborhood
MF GO:0050734 hydroxycinnamoyltransferase activity IEP Neighborhood
BP GO:0051791 medium-chain fatty acid metabolic process IEP Neighborhood
BP GO:0051792 medium-chain fatty acid biosynthetic process IEP Neighborhood
BP GO:0071616 acyl-CoA biosynthetic process IEP Neighborhood
MF GO:0072532 tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072533 tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072547 tricoumaroylspermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072548 dicoumaroyl monocaffeoyl spermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072549 monocoumaroyl dicaffeoyl spermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072550 triferuloylspermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072551 diferuloyl mono-(hydroxyferuloyl) spermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072552 monoferuloyl di-(hydroxyferuloyl) spermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0080030 methyl indole-3-acetate esterase activity IEP Neighborhood
MF GO:0080072 spermidine:sinapoyl CoA N-acyltransferase activity IEP Neighborhood
MF GO:0080073 spermidine:coumaroyl CoA N-acyltransferase activity IEP Neighborhood
MF GO:0080074 spermidine:caffeoyl CoA N-acyltransferase activity IEP Neighborhood
MF GO:0080075 spermidine:feruloyl CoA N-acyltransferase activity IEP Neighborhood
BP GO:0080088 spermidine hydroxycinnamate conjugate biosynthetic process IEP Neighborhood
BP GO:0080110 sporopollenin biosynthetic process IEP Neighborhood
MF GO:0090439 tetraketide alpha-pyrone synthase activity IEP Neighborhood
BP GO:0090691 formation of plant organ boundary IEP Neighborhood
BP GO:0098661 inorganic anion transmembrane transport IEP Neighborhood
BP GO:1900150 regulation of defense response to fungus IEP Neighborhood
InterPro domains Description Start Stop
IPR033640 FAR_C 542 613
IPR013120 Male_sterile_NAD-bd 135 437
No external refs found!