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  5. Zm00001e006067_P001

Zm00001e006067_P001


Description : Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana (sp|q8w496|ptc52_arath : 514.0)


Gene families : OG0001120 (Archaeplastida) Phylogenetic Tree(s): OG0001120_tree ,
OG_05_0004975 (LandPlants) Phylogenetic Tree(s): OG_05_0004975_tree ,
OG_06_0005252 (SeedPlants) Phylogenetic Tree(s): OG_06_0005252_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006067_P001
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00127460 evm_27.TU.AmTr_v1... Protochlorophyllide-dependent translocon component 52,... 0.05 Archaeplastida
AT4G25650 TIC55-IV,... ACD1-like 0.03 Archaeplastida
Cpa|evm.model.tig00000681.17 No alias Protein TIC 55, chloroplastic OS=Arabidopsis thaliana 0.01 Archaeplastida
Cre10.g450550 No alias Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01025446001 No alias Protochlorophyllide-dependent translocon component 52,... 0.07 Archaeplastida
Gb_36694 No alias Protochlorophyllide-dependent translocon component 52,... 0.1 Archaeplastida
Gb_37383 No alias Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis... 0.02 Archaeplastida
Gb_37385 No alias Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g59120.1 No alias Protochlorophyllide-dependent translocon component 52,... 0.12 Archaeplastida
MA_10436082g0010 No alias Protochlorophyllide-dependent translocon component 52,... 0.06 Archaeplastida
Mp6g13750.1 No alias Protochlorophyllide-dependent translocon component 52,... 0.03 Archaeplastida
Pp3c2_6220V3.1 No alias ACD1-like 0.07 Archaeplastida
Pp3c3_19130V3.1 No alias Pheophorbide a oxygenase family protein with Rieske... 0.06 Archaeplastida
Smo130316 No alias Protochlorophyllide-dependent translocon component 52,... 0.04 Archaeplastida
Solyc04g040160.4.1 No alias Protochlorophyllide-dependent translocon component 52,... 0.02 Archaeplastida
Solyc11g066440.2.1 No alias pheophorbide a oxygenase (PAO) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEA Interproscan
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004089 carbonate dehydratase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR017941 Rieske_2Fe-2S 81 165
IPR013626 PaO 299 385
No external refs found!