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  5. AT3G18500

AT3G18500


Description : DNAse I-like superfamily protein


Gene families : OG0002586 (Archaeplastida) Phylogenetic Tree(s): OG0002586_tree ,
OG_05_0002517 (LandPlants) Phylogenetic Tree(s): OG_05_0002517_tree ,
OG_06_0003170 (SeedPlants) Phylogenetic Tree(s): OG_06_0003170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G18500
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008252001 No alias Carbon catabolite repressor protein 4 homolog 3... 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000023 maltose metabolic process RCA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0019252 starch biosynthetic process RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade IEP Neighborhood
MF GO:0001067 regulatory region nucleic acid binding IEP Neighborhood
BP GO:0002682 regulation of immune system process IEP Neighborhood
MF GO:0004407 histone deacetylase activity IEP Neighborhood
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Neighborhood
BP GO:0006071 glycerol metabolic process IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006090 pyruvate metabolic process IEP Neighborhood
BP GO:0006098 pentose-phosphate shunt IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006476 protein deacetylation IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006636 unsaturated fatty acid biosynthetic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Neighborhood
BP GO:0006739 NADP metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0006760 folic acid-containing compound metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006787 porphyrin-containing compound catabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0008300 isoprenoid catabolic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
MF GO:0008864 formyltetrahydrofolate deformylase activity IEP Neighborhood
MF GO:0008889 glycerophosphodiester phosphodiesterase activity IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Neighborhood
CC GO:0009368 endopeptidase Clp complex IEP Neighborhood
BP GO:0009405 pathogenesis IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009526 plastid envelope IEP Neighborhood
CC GO:0009532 plastid stroma IEP Neighborhood
CC GO:0009534 chloroplast thylakoid IEP Neighborhood
CC GO:0009535 chloroplast thylakoid membrane IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0009566 fertilization IEP Neighborhood
BP GO:0009567 double fertilization forming a zygote and endosperm IEP Neighborhood
CC GO:0009570 chloroplast stroma IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0009595 detection of biotic stimulus IEP Neighborhood
BP GO:0009617 response to bacterium IEP Neighborhood
BP GO:0009657 plastid organization IEP Neighborhood
BP GO:0009658 chloroplast organization IEP Neighborhood
BP GO:0009668 plastid membrane organization IEP Neighborhood
BP GO:0009696 salicylic acid metabolic process IEP Neighborhood
BP GO:0009697 salicylic acid biosynthetic process IEP Neighborhood
CC GO:0009840 chloroplastic endopeptidase Clp complex IEP Neighborhood
BP GO:0009853 photorespiration IEP Neighborhood
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009863 salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009867 jasmonic acid mediated signaling pathway IEP Neighborhood
BP GO:0009891 positive regulation of biosynthetic process IEP Neighborhood
BP GO:0009902 chloroplast relocation IEP Neighborhood
CC GO:0009941 chloroplast envelope IEP Neighborhood
MF GO:0009977 proton motive force dependent protein transmembrane transporter activity IEP Neighborhood
BP GO:0010027 thylakoid membrane organization IEP Neighborhood
BP GO:0010193 response to ozone IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
BP GO:0010270 photosystem II oxygen evolving complex assembly IEP Neighborhood
CC GO:0010287 plastoglobule IEP Neighborhood
BP GO:0010304 PSII associated light-harvesting complex II catabolic process IEP Neighborhood
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0010363 regulation of plant-type hypersensitive response IEP Neighborhood
BP GO:0010380 regulation of chlorophyll biosynthetic process IEP Neighborhood
MF GO:0010436 carotenoid dioxygenase activity IEP Neighborhood
BP GO:0010478 chlororespiration IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010628 positive regulation of gene expression IEP Neighborhood
BP GO:0010941 regulation of cell death IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015995 chlorophyll biosynthetic process IEP Neighborhood
BP GO:0015996 chlorophyll catabolic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016032 viral process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0016108 tetraterpenoid metabolic process IEP Neighborhood
BP GO:0016109 tetraterpenoid biosynthetic process IEP Neighborhood
BP GO:0016110 tetraterpenoid catabolic process IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
BP GO:0016115 terpenoid catabolic process IEP Neighborhood
BP GO:0016116 carotenoid metabolic process IEP Neighborhood
BP GO:0016117 carotenoid biosynthetic process IEP Neighborhood
BP GO:0016118 carotenoid catabolic process IEP Neighborhood
BP GO:0016119 carotene metabolic process IEP Neighborhood
BP GO:0016121 carotene catabolic process IEP Neighborhood
BP GO:0016122 xanthophyll metabolic process IEP Neighborhood
BP GO:0016124 xanthophyll catabolic process IEP Neighborhood
BP GO:0016143 S-glycoside metabolic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
BP GO:0016556 mRNA modification IEP Neighborhood
BP GO:0016575 histone deacetylation IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0016987 sigma factor activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0018958 phenol-containing compound metabolic process IEP Neighborhood
MF GO:0019213 deacetylase activity IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Neighborhood
BP GO:0019362 pyridine nucleotide metabolic process IEP Neighborhood
BP GO:0019400 alditol metabolic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
BP GO:0019685 photosynthesis, dark reaction IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
BP GO:0019750 chloroplast localization IEP Neighborhood
BP GO:0019757 glycosinolate metabolic process IEP Neighborhood
BP GO:0019760 glucosinolate metabolic process IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
MF GO:0019902 phosphatase binding IEP Neighborhood
MF GO:0019903 protein phosphatase binding IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
BP GO:0023014 signal transduction by protein phosphorylation IEP Neighborhood
BP GO:0030002 cellular anion homeostasis IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
BP GO:0030320 cellular monovalent inorganic anion homeostasis IEP Neighborhood
MF GO:0030504 inorganic diphosphate transmembrane transporter activity IEP Neighborhood
BP GO:0030643 cellular phosphate ion homeostasis IEP Neighborhood
BP GO:0031325 positive regulation of cellular metabolic process IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031347 regulation of defense response IEP Neighborhood
BP GO:0031348 negative regulation of defense response IEP Neighborhood
CC GO:0031360 intrinsic component of thylakoid membrane IEP Neighborhood
CC GO:0031361 integral component of thylakoid membrane IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0031407 oxylipin metabolic process IEP Neighborhood
BP GO:0031408 oxylipin biosynthetic process IEP Neighborhood
CC GO:0031967 organelle envelope IEP Neighborhood
CC GO:0031975 envelope IEP Neighborhood
CC GO:0031976 plastid thylakoid IEP Neighborhood
CC GO:0031984 organelle subcompartment IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0033015 tetrapyrrole catabolic process IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
CC GO:0033281 TAT protein transport complex IEP Neighborhood
MF GO:0033558 protein deacetylase activity IEP Neighborhood
BP GO:0033559 unsaturated fatty acid metabolic process IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0035601 protein deacylation IEP Neighborhood
BP GO:0040011 locomotion IEP Neighborhood
BP GO:0042214 terpene metabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042537 benzene-containing compound metabolic process IEP Neighborhood
BP GO:0042558 pteridine-containing compound metabolic process IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
BP GO:0042742 defense response to bacterium IEP Neighborhood
BP GO:0042793 plastid transcription IEP Neighborhood
MF GO:0042903 tubulin deacetylase activity IEP Neighborhood
MF GO:0043014 alpha-tubulin binding IEP Neighborhood
BP GO:0043067 regulation of programmed cell death IEP Neighborhood
BP GO:0043085 positive regulation of catalytic activity IEP Neighborhood
BP GO:0043094 cellular metabolic compound salvage IEP Neighborhood
CC GO:0043235 receptor complex IEP Neighborhood
MF GO:0043621 protein self-association IEP Neighborhood
BP GO:0043900 regulation of multi-organism process IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044000 movement in host IEP Neighborhood
BP GO:0044093 positive regulation of molecular function IEP Neighborhood
MF GO:0044212 transcription regulatory region DNA binding IEP Neighborhood
BP GO:0044257 cellular protein catabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0044403 symbiont process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044434 chloroplast part IEP Neighborhood
CC GO:0044435 plastid part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0044766 multi-organism transport IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0045088 regulation of innate immune response IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
MF GO:0045549 9-cis-epoxycarotenoid dioxygenase activity IEP Neighborhood
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0046149 pigment catabolic process IEP Neighborhood
BP GO:0046189 phenol-containing compound biosynthetic process IEP Neighborhood
BP GO:0046247 terpene catabolic process IEP Neighborhood
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Neighborhood
BP GO:0046471 phosphatidylglycerol metabolic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Neighborhood
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Neighborhood
BP GO:0046653 tetrahydrofolate metabolic process IEP Neighborhood
BP GO:0046739 transport of virus in multicellular host IEP Neighborhood
BP GO:0046794 transport of virus IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0048487 beta-tubulin binding IEP Neighborhood
BP GO:0048585 negative regulation of response to stimulus IEP Neighborhood
BP GO:0050776 regulation of immune response IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051156 glucose 6-phosphate metabolic process IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
BP GO:0051193 regulation of cofactor metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051254 positive regulation of RNA metabolic process IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0051606 detection of stimulus IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051644 plastid localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0051656 establishment of organelle localization IEP Neighborhood
BP GO:0051667 establishment of plastid localization IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
MF GO:0051721 protein phosphatase 2A binding IEP Neighborhood
BP GO:0051814 movement in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052126 movement in host environment IEP Neighborhood
BP GO:0052192 movement in environment of other organism involved in symbiotic interaction IEP Neighborhood
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Neighborhood
CC GO:0055035 plastid thylakoid membrane IEP Neighborhood
BP GO:0055062 phosphate ion homeostasis IEP Neighborhood
BP GO:0055081 anion homeostasis IEP Neighborhood
BP GO:0055083 monovalent inorganic anion homeostasis IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071214 cellular response to abiotic stimulus IEP Neighborhood
BP GO:0072501 cellular divalent inorganic anion homeostasis IEP Neighborhood
BP GO:0072502 cellular trivalent inorganic anion homeostasis IEP Neighborhood
BP GO:0072505 divalent inorganic anion homeostasis IEP Neighborhood
BP GO:0072506 trivalent inorganic anion homeostasis IEP Neighborhood
BP GO:0072524 pyridine-containing compound metabolic process IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0080135 regulation of cellular response to stress IEP Neighborhood
BP GO:0090042 tubulin deacetylation IEP Neighborhood
BP GO:0090056 regulation of chlorophyll metabolic process IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0090407 organophosphate biosynthetic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
BP GO:0098732 macromolecule deacylation IEP Neighborhood
BP GO:0104004 cellular response to environmental stimulus IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901401 regulation of tetrapyrrole metabolic process IEP Neighborhood
BP GO:1901463 regulation of tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:1902579 multi-organism localization IEP Neighborhood
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005135 Endo/exonuclease/phosphatase 113 413
No external refs found!