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  5. AT3G20810

AT3G20810 (JMJD5)


Aliases : JMJD5

Description : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein


Gene families : OG0003607 (Archaeplastida) Phylogenetic Tree(s): OG0003607_tree ,
OG_05_0006398 (LandPlants) Phylogenetic Tree(s): OG_05_0006398_tree ,
OG_06_0006511 (SeedPlants) Phylogenetic Tree(s): OG_06_0006511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G20810
Cluster HCCA: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g31380.1 No alias histone demethylase (PKDM12) 0.09 Archaeplastida
Solyc01g006680.4.1 No alias histone demethylase (PKDM12) 0.07 Archaeplastida
Zm00001e010065_P001 No alias histone demethylase (PKDM12) 0.06 Archaeplastida
Zm00001e024382_P005 No alias histone demethylase (PKDM12) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated RCA Interproscan
BP GO:0007623 circadian rhythm IMP Interproscan
BP GO:0042752 regulation of circadian rhythm IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000025 maltose catabolic process IEP Neighborhood
MF GO:0000156 phosphorelay response regulator activity IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
BP GO:0000380 alternative mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003844 1,4-alpha-glucan branching enzyme activity IEP Neighborhood
MF GO:0003933 GTP cyclohydrolase activity IEP Neighborhood
MF GO:0003935 GTP cyclohydrolase II activity IEP Neighborhood
MF GO:0004133 glycogen debranching enzyme activity IEP Neighborhood
MF GO:0004134 4-alpha-glucanotransferase activity IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0005982 starch metabolic process IEP Neighborhood
BP GO:0005983 starch catabolic process IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006301 postreplication repair IEP Neighborhood
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
BP GO:0006405 RNA export from nucleus IEP Neighborhood
BP GO:0006406 mRNA export from nucleus IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006972 hyperosmotic response IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006995 cellular response to nitrogen starvation IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009251 glucan catabolic process IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
BP GO:0009269 response to desiccation IEP Neighborhood
BP GO:0009313 oligosaccharide catabolic process IEP Neighborhood
BP GO:0009409 response to cold IEP Neighborhood
BP GO:0009414 response to water deprivation IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009532 plastid stroma IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009569 chloroplast starch grain IEP Neighborhood
CC GO:0009570 chloroplast stroma IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009639 response to red or far red light IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010017 red or far-red light signaling pathway IEP Neighborhood
BP GO:0010018 far-red light signaling pathway IEP Neighborhood
BP GO:0010021 amylopectin biosynthetic process IEP Neighborhood
BP GO:0010031 circumnutation IEP Neighborhood
BP GO:0010043 response to zinc ion IEP Neighborhood
BP GO:0010099 regulation of photomorphogenesis IEP Neighborhood
BP GO:0010100 negative regulation of photomorphogenesis IEP Neighborhood
BP GO:0010119 regulation of stomatal movement IEP Neighborhood
BP GO:0010501 RNA secondary structure unwinding IEP Neighborhood
CC GO:0015629 actin cytoskeleton IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016695 oxidoreductase activity, acting on hydrogen as donor IEP Neighborhood
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
MF GO:0019156 isoamylase activity IEP Neighborhood
MF GO:0019238 cyclohydrolase activity IEP Neighborhood
BP GO:0019252 starch biosynthetic process IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0032091 negative regulation of protein binding IEP Neighborhood
BP GO:0032392 DNA geometric change IEP Neighborhood
BP GO:0032508 DNA duplex unwinding IEP Neighborhood
BP GO:0033354 chlorophyll cycle IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
CC GO:0043036 starch grain IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043393 regulation of protein binding IEP Neighborhood
BP GO:0043562 cellular response to nitrogen levels IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044247 cellular polysaccharide catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0044275 cellular carbohydrate catabolic process IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046352 disaccharide catabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046995 oxidoreductase activity, acting on hydrogen as donor, with other known acceptors IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048571 long-day photoperiodism IEP Neighborhood
BP GO:0048574 long-day photoperiodism, flowering IEP Neighborhood
BP GO:0048579 negative regulation of long-day photoperiodism, flowering IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048581 negative regulation of post-embryonic development IEP Neighborhood
BP GO:0048585 negative regulation of response to stimulus IEP Neighborhood
BP GO:0048586 regulation of long-day photoperiodism, flowering IEP Neighborhood
MF GO:0050454 coenzyme F420 hydrogenase activity IEP Neighborhood
BP GO:0050657 nucleic acid transport IEP Neighborhood
BP GO:0050658 RNA transport IEP Neighborhood
BP GO:0050879 multicellular organismal movement IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051015 actin filament binding IEP Neighborhood
BP GO:0051017 actin filament bundle assembly IEP Neighborhood
BP GO:0051028 mRNA transport IEP Neighborhood
BP GO:0051093 negative regulation of developmental process IEP Neighborhood
BP GO:0051098 regulation of binding IEP Neighborhood
BP GO:0051100 negative regulation of binding IEP Neighborhood
BP GO:0051168 nuclear export IEP Neighborhood
BP GO:0051236 establishment of RNA localization IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051241 negative regulation of multicellular organismal process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
BP GO:0061572 actin filament bundle organization IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0071478 cellular response to radiation IEP Neighborhood
BP GO:0071482 cellular response to light stimulus IEP Neighborhood
BP GO:0071489 cellular response to red or far red light IEP Neighborhood
BP GO:0071490 cellular response to far red light IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0090415 7-hydroxymethyl chlorophyll a reductase activity IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000028 regulation of photoperiodism, flowering IEP Neighborhood
BP GO:2000030 regulation of response to red or far red light IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood
BP GO:2000242 negative regulation of reproductive process IEP Neighborhood
BP GO:2000896 amylopectin metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!