AT3G22110 (PAC1)


Aliases : PAC1

Description : 20S proteasome alpha subunit C1


Gene families : OG0003320 (Archaeplastida) Phylogenetic Tree(s): OG0003320_tree ,
OG_05_0004054 (LandPlants) Phylogenetic Tree(s): OG_05_0004054_tree ,
OG_06_0004746 (SeedPlants) Phylogenetic Tree(s): OG_06_0004746_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G22110
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Cre10.g418100 No alias Protein degradation.26S proteasome.20S core... 0.01 Archaeplastida
Mp1g16770.1 No alias component alpha type-3 of 26S proteasome 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IDA Interproscan
CC GO:0005773 vacuole IDA Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005839 proteasome core complex TAS Interproscan
BP GO:0006094 gluconeogenesis RCA Interproscan
BP GO:0006096 glycolytic process RCA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process TAS Interproscan
MF GO:0008233 peptidase activity ISS Interproscan
BP GO:0009651 response to salt stress RCA Interproscan
CC GO:0022626 cytosolic ribosome IDA Interproscan
BP GO:0046686 response to cadmium ion IEP Interproscan
BP GO:0046686 response to cadmium ion RCA Interproscan
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
BP GO:0000154 rRNA modification IEP Neighborhood
MF GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity IEP Neighborhood
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000280 nuclear division IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
CC GO:0000418 RNA polymerase IV complex IEP Neighborhood
CC GO:0000419 RNA polymerase V complex IEP Neighborhood
CC GO:0000428 DNA-directed RNA polymerase complex IEP Neighborhood
BP GO:0000719 photoreactive repair IEP Neighborhood
CC GO:0000792 heterochromatin IEP Neighborhood
CC GO:0000815 ESCRT III complex IEP Neighborhood
CC GO:0001673 male germ cell nucleus IEP Neighborhood
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Neighborhood
MF GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity IEP Neighborhood
MF GO:0004022 alcohol dehydrogenase (NAD) activity IEP Neighborhood
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
MF GO:0004360 glutamine-fructose-6-phosphate transaminase (isomerizing) activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004610 phosphoacetylglucosamine mutase activity IEP Neighborhood
MF GO:0004614 phosphoglucomutase activity IEP Neighborhood
MF GO:0004758 serine C-palmitoyltransferase activity IEP Neighborhood
MF GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity IEP Neighborhood
MF GO:0005200 structural constituent of cytoskeleton IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005720 nuclear heterochromatin IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
CC GO:0005771 multivesicular body IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006041 glucosamine metabolic process IEP Neighborhood
BP GO:0006042 glucosamine biosynthetic process IEP Neighborhood
BP GO:0006047 UDP-N-acetylglucosamine metabolic process IEP Neighborhood
BP GO:0006048 UDP-N-acetylglucosamine biosynthetic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006290 pyrimidine dimer repair IEP Neighborhood
BP GO:0006304 DNA modification IEP Neighborhood
BP GO:0006305 DNA alkylation IEP Neighborhood
BP GO:0006306 DNA methylation IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006560 proline metabolic process IEP Neighborhood
BP GO:0006561 proline biosynthetic process IEP Neighborhood
BP GO:0006611 protein export from nucleus IEP Neighborhood
BP GO:0006783 heme biosynthetic process IEP Neighborhood
BP GO:0006900 vesicle budding from membrane IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007029 endoplasmic reticulum organization IEP Neighborhood
BP GO:0007032 endosome organization IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
BP GO:0008284 positive regulation of cell proliferation IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
MF GO:0008649 rRNA methyltransferase activity IEP Neighborhood
MF GO:0008793 aromatic-amino-acid:2-oxoglutarate aminotransferase activity IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009414 response to water deprivation IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009616 virus induced gene silencing IEP Neighborhood
BP GO:0009639 response to red or far red light IEP Neighborhood
BP GO:0009640 photomorphogenesis IEP Neighborhood
BP GO:0009641 shade avoidance IEP Neighborhood
BP GO:0009683 indoleacetic acid metabolic process IEP Neighborhood
BP GO:0009684 indoleacetic acid biosynthetic process IEP Neighborhood
BP GO:0009756 carbohydrate mediated signaling IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009791 post-embryonic development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
BP GO:0009845 seed germination IEP Neighborhood
BP GO:0009850 auxin metabolic process IEP Neighborhood
BP GO:0009870 defense response signaling pathway, resistance gene-dependent IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009933 meristem structural organization IEP Neighborhood
BP GO:0010050 vegetative phase change IEP Neighborhood
BP GO:0010078 maintenance of root meristem identity IEP Neighborhood
BP GO:0010098 suspensor development IEP Neighborhood
BP GO:0010115 regulation of abscisic acid biosynthetic process IEP Neighborhood
BP GO:0010162 seed dormancy process IEP Neighborhood
BP GO:0010182 sugar mediated signaling pathway IEP Neighborhood
BP GO:0010204 defense response signaling pathway, resistance gene-independent IEP Neighborhood
MF GO:0010301 xanthoxin dehydrogenase activity IEP Neighborhood
MF GO:0010326 methionine-oxo-acid transaminase activity IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
BP GO:0010586 miRNA metabolic process IEP Neighborhood
BP GO:0010587 miRNA catabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0015939 pantothenate metabolic process IEP Neighborhood
BP GO:0015940 pantothenate biosynthetic process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016050 vesicle organization IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016408 C-acyltransferase activity IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016433 rRNA (adenine) methyltransferase activity IEP Neighborhood
BP GO:0016441 posttranscriptional gene silencing IEP Neighborhood
MF GO:0016454 C-palmitoyltransferase activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016572 histone phosphorylation IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
CC GO:0016602 CCAAT-binding factor complex IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
BP GO:0019255 glucose 1-phosphate metabolic process IEP Neighborhood
BP GO:0019747 regulation of isoprenoid metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022611 dormancy process IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
BP GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0034661 ncRNA catabolic process IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0035194 posttranscriptional gene silencing by RNA IEP Neighborhood
BP GO:0035966 response to topologically incorrect protein IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
CC GO:0042644 chloroplast nucleoid IEP Neighborhood
CC GO:0042646 plastid nucleoid IEP Neighborhood
CC GO:0043073 germ cell nucleus IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0043687 post-translational protein modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0044728 DNA methylation or demethylation IEP Neighborhood
BP GO:0046349 amino sugar biosynthetic process IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
MF GO:0047312 L-phenylalanine:pyruvate aminotransferase activity IEP Neighborhood
MF GO:0047635 alanine-oxo-acid transaminase activity IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
BP GO:0048316 seed development IEP Neighborhood
BP GO:0048366 leaf development IEP Neighborhood
MF GO:0048487 beta-tubulin binding IEP Neighborhood
BP GO:0048532 anatomical structure arrangement IEP Neighborhood
BP GO:0048608 reproductive structure development IEP Neighborhood
BP GO:0048609 multicellular organismal reproductive process IEP Neighborhood
BP GO:0048825 cotyledon development IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
MF GO:0050048 L-leucine:2-oxoglutarate aminotransferase activity IEP Neighborhood
MF GO:0050362 L-tryptophan:2-oxoglutarate aminotransferase activity IEP Neighborhood
BP GO:0050826 response to freezing IEP Neighborhood
BP GO:0051211 anisotropic cell growth IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0051567 histone H3-K9 methylation IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0051788 response to misfolded protein IEP Neighborhood
BP GO:0052018 modulation by symbiont of RNA levels in host IEP Neighborhood
BP GO:0052249 modulation of RNA levels in other organism involved in symbiotic interaction IEP Neighborhood
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Neighborhood
BP GO:0055047 generative cell mitosis IEP Neighborhood
BP GO:0061647 histone H3-K9 modification IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
MF GO:0070529 L-tryptophan aminotransferase activity IEP Neighborhood
MF GO:0070546 L-phenylalanine aminotransferase activity IEP Neighborhood
MF GO:0070547 L-tyrosine aminotransferase activity IEP Neighborhood
MF GO:0070548 L-glutamine aminotransferase activity IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0080024 indolebutyric acid metabolic process IEP Neighborhood
BP GO:0080026 response to indolebutyric acid IEP Neighborhood
MF GO:0080054 low-affinity nitrate transmembrane transporter activity IEP Neighborhood
MF GO:0080097 L-tryptophan:pyruvate aminotransferase activity IEP Neighborhood
MF GO:0080098 L-tyrosine:pyruvate aminotransferase activity IEP Neighborhood
MF GO:0080099 L-methionine:2-oxoglutarate aminotransferase activity IEP Neighborhood
MF GO:0080100 L-glutamine:2-oxoglutarate aminotransferase activity IEP Neighborhood
BP GO:0080129 proteasome core complex assembly IEP Neighborhood
MF GO:0080130 L-phenylalanine:2-oxoglutarate aminotransferase activity IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
BP GO:0098586 cellular response to virus IEP Neighborhood
BP GO:0140014 mitotic nuclear division IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901073 glucosamine-containing compound biosynthetic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1902930 regulation of alcohol biosynthetic process IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 30 214
IPR000426 Proteasome_asu_N 5 27
No external refs found!