Zm00001e020190_P001

Description : transcription factor (DOF)

Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0021911 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e020190_P001
Cluster	HCCA: Cluster_230

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00049300	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
AT2G34140	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT5G02460	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT5G60200	TMO6	TARGET OF MONOPTEROS 6	0.03	Archaeplastida
LOC_Os01g48290.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os01g55340.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os02g45200.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os02g47810.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
LOC_Os07g32510.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
LOC_Os08g38220.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os09g29960.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os10g26620.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
Pp3c17_3860V3.1	No alias	OBF binding protein 4	0.03	Archaeplastida
Pp3c19_19050V3.1	No alias	TARGET OF MONOPTEROS 6	0.03	Archaeplastida
Pp3c3_950V3.1	No alias	cycling DOF factor 3	0.02	Archaeplastida
Pp3c6_13360V3.1	No alias	cycling DOF factor 3	0.02	Archaeplastida
Pp3c9_4910V3.1	No alias	cycling DOF factor 2	0.03	Archaeplastida
Solyc02g077950.3.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
Solyc09g010680.3.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e006190_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e010022_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e028672_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e035074_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
CC	GO:0005787	signal peptidase complex	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006465	signal peptide processing	IEP	Neighborhood
BP	GO:0016485	protein processing	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016830	carbon-carbon lyase activity	IEP	Neighborhood
MF	GO:0016831	carboxy-lyase activity	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
MF	GO:0019842	vitamin binding	IEP	Neighborhood
MF	GO:0030170	pyridoxal phosphate binding	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
CC	GO:0044432	endoplasmic reticulum part	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
BP	GO:0051604	protein maturation	IEP	Neighborhood
MF	GO:0070279	vitamin B6 binding	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
CC	GO:1905368	peptidase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	67	120

External Links

No external refs found!

Zm00001e020190_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation