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  5. Zm00001e020240_P001

Zm00001e020240_P001


Description : endo-beta-1,4-mannanase


Gene families : OG0000315 (Archaeplastida) Phylogenetic Tree(s): OG0000315_tree ,
OG_05_0000179 (LandPlants) Phylogenetic Tree(s): OG_05_0000179_tree ,
OG_06_0001045 (SeedPlants) Phylogenetic Tree(s): OG_06_0001045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e020240_P001
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00158370 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
AMTR_s00011p00202020 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.heteromannan.modification and... 0.05 Archaeplastida
AMTR_s00077p00136900 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
AMTR_s00099p00070100 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.heteromannan.modification and... 0.04 Archaeplastida
AT1G02310 MAN1 Glycosyl hydrolase superfamily protein 0.02 Archaeplastida
GSVIVT01009746001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
GSVIVT01018923001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.04 Archaeplastida
GSVIVT01030163001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
GSVIVT01037214001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
Gb_04673 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Gb_18866 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Gb_18867 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Gb_23961 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Gb_29706 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Gb_30579 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Gb_33018 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
LOC_Os01g47400.1 No alias endo-beta-1,4-mannanase 0.08 Archaeplastida
MA_10358593g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10426380g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_10436185g0010 No alias Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis... 0.02 Archaeplastida
MA_71720g0010 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
MA_8194133g0010 No alias Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c2_29970V3.1 No alias Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
Pp3c5_23790V3.1 No alias Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
Smo101148 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
Solyc02g084990.3.1 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Solyc04g080620.3.1 No alias endo-beta-1,4-mannanase 0.05 Archaeplastida
Solyc07g053920.3.1 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Solyc11g012190.3.1 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Solyc12g013770.3.1 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 41 330
No external refs found!