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  5. Zm00001e034908_P002

Zm00001e034908_P002


Description : actin stability factor (PMI1/PMI15)


Gene families : OG0008838 (Archaeplastida) Phylogenetic Tree(s): OG0008838_tree ,
OG_05_0007911 (LandPlants) Phylogenetic Tree(s): OG_05_0007911_tree ,
OG_06_0005461 (SeedPlants) Phylogenetic Tree(s): OG_06_0005461_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e034908_P002
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00107090 evm_27.TU.AmTr_v1... Cytoskeleton.cp-actin-dependent plastid... 0.03 Archaeplastida
GSVIVT01013417001 No alias Cytoskeleton.cp-actin-dependent plastid... 0.07 Archaeplastida
LOC_Os09g38090.1 No alias actin stability factor (PMI1/PMI15) 0.06 Archaeplastida
LOC_Os10g39430.1 No alias actin stability factor (PMI1/PMI15) 0.02 Archaeplastida
MA_10427730g0010 No alias actin stability factor (PMI1/PMI15). actin stability... 0.03 Archaeplastida
MA_2903265g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc10g006330.3.1 No alias actin stability factor (PMI1/PMI15) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0004097 catechol oxidase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR019448 NT-C2 209 356
No external refs found!