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  5. AT3G51040

AT3G51040 (RTH)


Aliases : RTH

Description : RTE1-homolog


Gene families : OG0003145 (Archaeplastida) Phylogenetic Tree(s): OG0003145_tree ,
OG_05_0002745 (LandPlants) Phylogenetic Tree(s): OG_05_0002745_tree ,
OG_06_0003072 (SeedPlants) Phylogenetic Tree(s): OG_06_0003072_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G51040
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g51430.1 No alias Protein REVERSION-TO-ETHYLENE SENSITIVITY1... 0.03 Archaeplastida
Mp1g29830.1 No alias Protein REVERSION-TO-ETHYLENE SENSITIVITY1... 0.04 Archaeplastida
Zm00001e032270_P001 No alias Protein REVERSION-TO-ETHYLENE SENSITIVITY1... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0006661 phosphatidylinositol biosynthetic process RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000103 sulfate assimilation IEP Neighborhood
MF GO:0000309 nicotinamide-nucleotide adenylyltransferase activity IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
BP GO:0000902 cell morphogenesis IEP Neighborhood
BP GO:0002238 response to molecule of fungal origin IEP Neighborhood
MF GO:0004515 nicotinate-nucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
CC GO:0005770 late endosome IEP Neighborhood
CC GO:0005798 Golgi-associated vesicle IEP Neighborhood
CC GO:0005885 Arp2/3 protein complex IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0009001 serine O-acetyltransferase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0009435 NAD biosynthetic process IEP Neighborhood
BP GO:0009648 photoperiodism IEP Neighborhood
BP GO:0009660 amyloplast organization IEP Neighborhood
BP GO:0009894 regulation of catabolic process IEP Neighborhood
BP GO:0009895 negative regulation of catabolic process IEP Neighborhood
BP GO:0009959 negative gravitropism IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
MF GO:0016412 serine O-acyltransferase activity IEP Neighborhood
MF GO:0016413 O-acetyltransferase activity IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
CC GO:0016607 nuclear speck IEP Neighborhood
BP GO:0016925 protein sumoylation IEP Neighborhood
MF GO:0017091 AU-rich element binding IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
BP GO:0019674 NAD metabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
CC GO:0030133 transport vesicle IEP Neighborhood
CC GO:0030135 coated vesicle IEP Neighborhood
CC GO:0030136 clathrin-coated vesicle IEP Neighborhood
CC GO:0030140 trans-Golgi network transport vesicle IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0031329 regulation of cellular catabolic process IEP Neighborhood
BP GO:0031330 negative regulation of cellular catabolic process IEP Neighborhood
BP GO:0032989 cellular component morphogenesis IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043487 regulation of RNA stability IEP Neighborhood
BP GO:0043488 regulation of mRNA stability IEP Neighborhood
BP GO:0043489 RNA stabilization IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0048255 mRNA stabilization IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048573 photoperiodism, flowering IEP Neighborhood
BP GO:0055063 sulfate ion homeostasis IEP Neighborhood
BP GO:0055081 anion homeostasis IEP Neighborhood
BP GO:0061013 regulation of mRNA catabolic process IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0071484 cellular response to light intensity IEP Neighborhood
BP GO:0071486 cellular response to high light intensity IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
BP GO:0072505 divalent inorganic anion homeostasis IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1902369 negative regulation of RNA catabolic process IEP Neighborhood
BP GO:1902373 negative regulation of mRNA catabolic process IEP Neighborhood
BP GO:1903311 regulation of mRNA metabolic process IEP Neighborhood
BP GO:1903312 negative regulation of mRNA metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR008496 DUF778 38 94
IPR008496 DUF778 101 175
No external refs found!