AT3G52940 (ELL1, HYD2, FK)

Aliases : ELL1, HYD2, FK

Description : Ergosterol biosynthesis ERG4/ERG24 family

Gene families : OG0002082 (Archaeplastida) Phylogenetic Tree(s): OG0002082_tree ,
OG_05_0008818 (LandPlants) Phylogenetic Tree(s): OG_05_0008818_tree ,
OG_06_0008404 (SeedPlants) Phylogenetic Tree(s): OG_06_0008404_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G52940
Cluster	HCCA: Cluster_226

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os02g26650.3	No alias	sterol delta7 reductase	0.04	Archaeplastida
Mp2g07930.1	No alias	sterol delta7 reductase	0.03	Archaeplastida
Pp3c16_12420V3.1	No alias	Ergosterol biosynthesis ERG4/ERG24 family	0.02	Archaeplastida
Pp3c24_10460V3.1	No alias	Ergosterol biosynthesis ERG4/ERG24 family	0.05	Archaeplastida
Solyc06g074090.3.1	No alias	sterol delta7 reductase	0.03	Archaeplastida
Solyc09g009040.3.1	No alias	sterol delta14 reductase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006084	acetyl-CoA metabolic process	RCA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006637	acyl-CoA metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006722	triterpenoid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006732	coenzyme metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010817	regulation of hormone levels	None	Extended
BP	GO:0016104	triterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
BP	GO:0016125	sterol metabolic process	None	Extended
BP	GO:0016126	sterol biosynthetic process	RCA	Interproscan
BP	GO:0016126	sterol biosynthetic process	TAS	Interproscan
BP	GO:0016128	phytosteroid metabolic process	None	Extended
BP	GO:0016129	phytosteroid biosynthetic process	None	Extended
BP	GO:0016131	brassinosteroid metabolic process	None	Extended
BP	GO:0016132	brassinosteroid biosynthetic process	RCA	Interproscan
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	None	Extended
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0019742	pentacyclic triterpenoid metabolic process	None	Extended
BP	GO:0019745	pentacyclic triterpenoid biosynthetic process	RCA	Interproscan
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033865	nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0035383	thioester metabolic process	None	Extended
BP	GO:0042445	hormone metabolic process	None	Extended
BP	GO:0042446	hormone biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
MF	GO:0050613	delta14-sterol reductase activity	IMP	Interproscan
MF	GO:0050613	delta14-sterol reductase activity	IGI	Interproscan
BP	GO:0051186	cofactor metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	Neighborhood
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Neighborhood
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0000338	protein deneddylation	IEP	Neighborhood
BP	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation	IEP	Neighborhood
MF	GO:0003727	single-stranded RNA binding	IEP	Neighborhood
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	Neighborhood
MF	GO:0004312	fatty acid synthase activity	IEP	Neighborhood
MF	GO:0004315	3-oxoacyl-[acyl-carrier-protein] synthase activity	IEP	Neighborhood
MF	GO:0005484	SNAP receptor activity	IEP	Neighborhood
CC	GO:0005768	endosome	IEP	Neighborhood
CC	GO:0005774	vacuolar membrane	IEP	Neighborhood
CC	GO:0005783	endoplasmic reticulum	IEP	Neighborhood
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Neighborhood
CC	GO:0005794	Golgi apparatus	IEP	Neighborhood
CC	GO:0005802	trans-Golgi network	IEP	Neighborhood
CC	GO:0005886	plasma membrane	IEP	Neighborhood
CC	GO:0005911	cell-cell junction	IEP	Neighborhood
BP	GO:0005996	monosaccharide metabolic process	IEP	Neighborhood
BP	GO:0006006	glucose metabolic process	IEP	Neighborhood
BP	GO:0006073	cellular glucan metabolic process	IEP	Neighborhood
BP	GO:0006109	regulation of carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0006366	transcription by RNA polymerase II	IEP	Neighborhood
BP	GO:0006396	RNA processing	IEP	Neighborhood
BP	GO:0006555	methionine metabolic process	IEP	Neighborhood
BP	GO:0006897	endocytosis	IEP	Neighborhood
BP	GO:0006907	pinocytosis	IEP	Neighborhood
BP	GO:0007010	cytoskeleton organization	IEP	Neighborhood
BP	GO:0007020	microtubule nucleation	IEP	Neighborhood
CC	GO:0008180	COP9 signalosome	IEP	Neighborhood
BP	GO:0008380	RNA splicing	IEP	Neighborhood
MF	GO:0008398	sterol 14-demethylase activity	IEP	Neighborhood
MF	GO:0008509	anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009086	methionine biosynthetic process	IEP	Neighborhood
BP	GO:0009250	glucan biosynthetic process	IEP	Neighborhood
CC	GO:0009506	plasmodesma	IEP	Neighborhood
CC	GO:0009524	phragmoplast	IEP	Neighborhood
BP	GO:0009894	regulation of catabolic process	IEP	Neighborhood
BP	GO:0009896	positive regulation of catabolic process	IEP	Neighborhood
BP	GO:0009958	positive gravitropism	IEP	Neighborhood
BP	GO:0010099	regulation of photomorphogenesis	IEP	Neighborhood
BP	GO:0010100	negative regulation of photomorphogenesis	IEP	Neighborhood
BP	GO:0010387	COP9 signalosome assembly	IEP	Neighborhood
BP	GO:0010389	regulation of G2/M transition of mitotic cell cycle	IEP	Neighborhood
BP	GO:0010565	regulation of cellular ketone metabolic process	IEP	Neighborhood
BP	GO:0010971	positive regulation of G2/M transition of mitotic cell cycle	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
BP	GO:0016192	vesicle-mediated transport	IEP	Neighborhood
MF	GO:0016229	steroid dehydrogenase activity	IEP	Neighborhood
BP	GO:0016579	protein deubiquitination	IEP	Neighborhood
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0016872	intramolecular lyase activity	IEP	Neighborhood
BP	GO:0019318	hexose metabolic process	IEP	Neighborhood
CC	GO:0019898	extrinsic component of membrane	IEP	Neighborhood
CC	GO:0030054	cell junction	IEP	Neighborhood
BP	GO:0030243	cellulose metabolic process	IEP	Neighborhood
BP	GO:0030244	cellulose biosynthetic process	IEP	Neighborhood
BP	GO:0030656	regulation of vitamin metabolic process	IEP	Neighborhood
CC	GO:0031090	organelle membrane	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0031410	cytoplasmic vesicle	IEP	Neighborhood
CC	GO:0031982	vesicle	IEP	Neighborhood
CC	GO:0031984	organelle subcompartment	IEP	Neighborhood
MF	GO:0032451	demethylase activity	IEP	Neighborhood
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
BP	GO:0042176	regulation of protein catabolic process	IEP	Neighborhood
BP	GO:0042335	cuticle development	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043255	regulation of carbohydrate biosynthetic process	IEP	Neighborhood
BP	GO:0043903	regulation of symbiosis, encompassing mutualism through parasitism	IEP	Neighborhood
BP	GO:0044042	glucan metabolic process	IEP	Neighborhood
BP	GO:0044283	small molecule biosynthetic process	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
CC	GO:0044431	Golgi apparatus part	IEP	Neighborhood
CC	GO:0044437	vacuolar part	IEP	Neighborhood
CC	GO:0044444	cytoplasmic part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
BP	GO:0045732	positive regulation of protein catabolic process	IEP	Neighborhood
BP	GO:0045787	positive regulation of cell cycle	IEP	Neighborhood
BP	GO:0045931	positive regulation of mitotic cell cycle	IEP	Neighborhood
BP	GO:0046719	regulation by virus of viral protein levels in host cell	IEP	Neighborhood
MF	GO:0047012	sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	IEP	Neighborhood
MF	GO:0047793	cycloeucalenol cycloisomerase activity	IEP	Neighborhood
BP	GO:0048193	Golgi vesicle transport	IEP	Neighborhood
BP	GO:0050792	regulation of viral process	IEP	Neighborhood
BP	GO:0051196	regulation of coenzyme metabolic process	IEP	Neighborhood
BP	GO:0051247	positive regulation of protein metabolic process	IEP	Neighborhood
BP	GO:0051273	beta-glucan metabolic process	IEP	Neighborhood
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Neighborhood
BP	GO:0062012	regulation of small molecule metabolic process	IEP	Neighborhood
BP	GO:0090068	positive regulation of cell cycle process	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
CC	GO:0097708	intracellular vesicle	IEP	Neighborhood
CC	GO:0098588	bounding membrane of organelle	IEP	Neighborhood
BP	GO:0098657	import into cell	IEP	Neighborhood
CC	GO:0098791	Golgi subcompartment	IEP	Neighborhood
CC	GO:0098805	whole membrane	IEP	Neighborhood
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Neighborhood
BP	GO:1901989	positive regulation of cell cycle phase transition	IEP	Neighborhood
BP	GO:1901992	positive regulation of mitotic cell cycle phase transition	IEP	Neighborhood
BP	GO:1902749	regulation of cell cycle G2/M phase transition	IEP	Neighborhood
BP	GO:1902751	positive regulation of cell cycle G2/M phase transition	IEP	Neighborhood
BP	GO:2000030	regulation of response to red or far red light	IEP	Neighborhood
BP	GO:2000082	regulation of L-ascorbic acid biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001171	Ergosterol_biosynth_ERG4_ERG24	15	369

External Links

No external refs found!

AT3G52940 (ELL1, HYD2, FK)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation