AT3G53090 (UPL7)

Aliases : UPL7

Description : ubiquitin-protein ligase 7

Gene families : OG0002131 (Archaeplastida) Phylogenetic Tree(s): OG0002131_tree ,
OG_05_0007571 (LandPlants) Phylogenetic Tree(s): OG_05_0007571_tree ,
OG_06_0009925 (SeedPlants) Phylogenetic Tree(s): OG_06_0009925_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G53090
Cluster	HCCA: Cluster_163

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00255750	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.04	Archaeplastida
AMTR_s00003p00213880	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.04	Archaeplastida
GSVIVT01033734001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.11	Archaeplastida
GSVIVT01034942001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.08	Archaeplastida
Gb_04194	No alias	monomeric E3 ubiquitin ligase (HECT)	0.04	Archaeplastida
Gb_22218	No alias	monomeric E3 ubiquitin ligase (HECT)	0.03	Archaeplastida
LOC_Os03g47949.1	No alias	monomeric E3 ubiquitin ligase (HECT)	0.07	Archaeplastida
LOC_Os05g06690.1	No alias	monomeric E3 ubiquitin ligase (HECT)	0.09	Archaeplastida
MA_158585g0010	No alias	no hits & (original description: none)	0.08	Archaeplastida
Pp3c17_16520V3.1	No alias	ubiquitin protein ligase 6	0.06	Archaeplastida
Smo443962	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.08	Archaeplastida
Solyc01g057900.3.1	No alias	monomeric E3 ubiquitin ligase (HECT)	0.08	Archaeplastida
Zm00001e031128_P003	No alias	monomeric E3 ubiquitin ligase (HECT)	0.07	Archaeplastida
Zm00001e039899_P001	No alias	monomeric E3 ubiquitin ligase (HECT)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	ISS	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISS	Interproscan
MF	GO:0004842	ubiquitin-protein transferase activity	IBA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006464	cellular protein modification process	ISS	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	ISS	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	IEP	Neighborhood
BP	GO:0000212	meiotic spindle organization	IEP	Neighborhood
BP	GO:0000226	microtubule cytoskeleton organization	IEP	Neighborhood
BP	GO:0000902	cell morphogenesis	IEP	Neighborhood
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	Neighborhood
CC	GO:0000932	P-body	IEP	Neighborhood
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	Neighborhood
BP	GO:0003006	developmental process involved in reproduction	IEP	Neighborhood
MF	GO:0003712	transcription coregulator activity	IEP	Neighborhood
MF	GO:0003774	motor activity	IEP	Neighborhood
MF	GO:0004069	L-aspartate:2-oxoglutarate aminotransferase activity	IEP	Neighborhood
MF	GO:0004402	histone acetyltransferase activity	IEP	Neighborhood
MF	GO:0004430	1-phosphatidylinositol 4-kinase activity	IEP	Neighborhood
MF	GO:0004439	phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	IEP	Neighborhood
MF	GO:0004712	protein serine/threonine/tyrosine kinase activity	IEP	Neighborhood
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005086	ARF guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
CC	GO:0005847	mRNA cleavage and polyadenylation specificity factor complex	IEP	Neighborhood
CC	GO:0005849	mRNA cleavage factor complex	IEP	Neighborhood
CC	GO:0005911	cell-cell junction	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0005996	monosaccharide metabolic process	IEP	Neighborhood
BP	GO:0006007	glucose catabolic process	IEP	Neighborhood
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Neighborhood
BP	GO:0006401	RNA catabolic process	IEP	Neighborhood
BP	GO:0006402	mRNA catabolic process	IEP	Neighborhood
BP	GO:0006473	protein acetylation	IEP	Neighborhood
BP	GO:0006486	protein glycosylation	IEP	Neighborhood
BP	GO:0006487	protein N-linked glycosylation	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
BP	GO:0006928	movement of cell or subcellular component	IEP	Neighborhood
BP	GO:0007015	actin filament organization	IEP	Neighborhood
BP	GO:0007017	microtubule-based process	IEP	Neighborhood
BP	GO:0007155	cell adhesion	IEP	Neighborhood
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	Neighborhood
MF	GO:0008080	N-acetyltransferase activity	IEP	Neighborhood
MF	GO:0008793	aromatic-amino-acid:2-oxoglutarate aminotransferase activity	IEP	Neighborhood
BP	GO:0009057	macromolecule catabolic process	IEP	Neighborhood
CC	GO:0009506	plasmodesma	IEP	Neighborhood
BP	GO:0009653	anatomical structure morphogenesis	IEP	Neighborhood
BP	GO:0009790	embryo development	IEP	Neighborhood
BP	GO:0009793	embryo development ending in seed dormancy	IEP	Neighborhood
BP	GO:0009887	animal organ morphogenesis	IEP	Neighborhood
BP	GO:0009892	negative regulation of metabolic process	IEP	Neighborhood
BP	GO:0009908	flower development	IEP	Neighborhood
BP	GO:0009914	hormone transport	IEP	Neighborhood
BP	GO:0009926	auxin polar transport	IEP	Neighborhood
BP	GO:0009954	proximal/distal pattern formation	IEP	Neighborhood
BP	GO:0010016	shoot system morphogenesis	IEP	Neighborhood
BP	GO:0010082	regulation of root meristem growth	IEP	Neighborhood
BP	GO:0010090	trichome morphogenesis	IEP	Neighborhood
BP	GO:0010100	negative regulation of photomorphogenesis	IEP	Neighborhood
BP	GO:0010191	mucilage metabolic process	IEP	Neighborhood
BP	GO:0010192	mucilage biosynthetic process	IEP	Neighborhood
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	Neighborhood
BP	GO:0010315	auxin efflux	IEP	Neighborhood
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0010410	hemicellulose metabolic process	IEP	Neighborhood
BP	GO:0010413	glucuronoxylan metabolic process	IEP	Neighborhood
BP	GO:0010452	histone H3-K36 methylation	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010541	acropetal auxin transport	IEP	Neighborhood
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0010629	negative regulation of gene expression	IEP	Neighborhood
BP	GO:0010638	positive regulation of organelle organization	IEP	Neighborhood
CC	GO:0012506	vesicle membrane	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
BP	GO:0016071	mRNA metabolic process	IEP	Neighborhood
MF	GO:0016407	acetyltransferase activity	IEP	Neighborhood
MF	GO:0016410	N-acyltransferase activity	IEP	Neighborhood
CC	GO:0016459	myosin complex	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0016847	1-aminocyclopropane-1-carboxylate synthase activity	IEP	Neighborhood
BP	GO:0016926	protein desumoylation	IEP	Neighborhood
BP	GO:0017000	antibiotic biosynthetic process	IEP	Neighborhood
MF	GO:0017016	Ras GTPase binding	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
MF	GO:0017137	Rab GTPase binding	IEP	Neighborhood
BP	GO:0018193	peptidyl-amino acid modification	IEP	Neighborhood
BP	GO:0018205	peptidyl-lysine modification	IEP	Neighborhood
BP	GO:0019320	hexose catabolic process	IEP	Neighborhood
BP	GO:0019321	pentose metabolic process	IEP	Neighborhood
BP	GO:0019439	aromatic compound catabolic process	IEP	Neighborhood
MF	GO:0019899	enzyme binding	IEP	Neighborhood
BP	GO:0022402	cell cycle process	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
BP	GO:0022610	biological adhesion	IEP	Neighborhood
BP	GO:0030029	actin filament-based process	IEP	Neighborhood
BP	GO:0030048	actin filament-based movement	IEP	Neighborhood
CC	GO:0030054	cell junction	IEP	Neighborhood
CC	GO:0030659	cytoplasmic vesicle membrane	IEP	Neighborhood
MF	GO:0030742	GTP-dependent protein binding	IEP	Neighborhood
BP	GO:0030832	regulation of actin filament length	IEP	Neighborhood
BP	GO:0030833	regulation of actin filament polymerization	IEP	Neighborhood
BP	GO:0030838	positive regulation of actin filament polymerization	IEP	Neighborhood
MF	GO:0031267	small GTPase binding	IEP	Neighborhood
BP	GO:0031334	positive regulation of protein complex assembly	IEP	Neighborhood
BP	GO:0032271	regulation of protein polymerization	IEP	Neighborhood
BP	GO:0032273	positive regulation of protein polymerization	IEP	Neighborhood
BP	GO:0032501	multicellular organismal process	IEP	Neighborhood
BP	GO:0032502	developmental process	IEP	Neighborhood
BP	GO:0032535	regulation of cellular component size	IEP	Neighborhood
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	Neighborhood
BP	GO:0032957	inositol trisphosphate metabolic process	IEP	Neighborhood
BP	GO:0032970	regulation of actin filament-based process	IEP	Neighborhood
BP	GO:0032989	cellular component morphogenesis	IEP	Neighborhood
BP	GO:0033043	regulation of organelle organization	IEP	Neighborhood
BP	GO:0033044	regulation of chromosome organization	IEP	Neighborhood
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	Neighborhood
MF	GO:0034593	phosphatidylinositol bisphosphate phosphatase activity	IEP	Neighborhood
MF	GO:0034595	phosphatidylinositol phosphate 5-phosphatase activity	IEP	Neighborhood
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Neighborhood
CC	GO:0035619	root hair tip	IEP	Neighborhood
CC	GO:0035770	ribonucleoprotein granule	IEP	Neighborhood
CC	GO:0036464	cytoplasmic ribonucleoprotein granule	IEP	Neighborhood
BP	GO:0042732	D-xylose metabolic process	IEP	Neighborhood
BP	GO:0042743	hydrogen peroxide metabolic process	IEP	Neighborhood
BP	GO:0043254	regulation of protein complex assembly	IEP	Neighborhood
BP	GO:0043413	macromolecule glycosylation	IEP	Neighborhood
BP	GO:0043484	regulation of RNA splicing	IEP	Neighborhood
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Neighborhood
BP	GO:0044089	positive regulation of cellular component biogenesis	IEP	Neighborhood
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Neighborhood
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Neighborhood
CC	GO:0044463	cell projection part	IEP	Neighborhood
BP	GO:0045010	actin nucleation	IEP	Neighborhood
BP	GO:0045491	xylan metabolic process	IEP	Neighborhood
BP	GO:0045492	xylan biosynthetic process	IEP	Neighborhood
BP	GO:0046365	monosaccharide catabolic process	IEP	Neighborhood
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Neighborhood
BP	GO:0046700	heterocycle catabolic process	IEP	Neighborhood
BP	GO:0048015	phosphatidylinositol-mediated signaling	IEP	Neighborhood
BP	GO:0048017	inositol lipid-mediated signaling	IEP	Neighborhood
BP	GO:0048281	inflorescence morphogenesis	IEP	Neighborhood
BP	GO:0048283	indeterminate inflorescence morphogenesis	IEP	Neighborhood
BP	GO:0048354	mucilage biosynthetic process involved in seed coat development	IEP	Neighborhood
BP	GO:0048359	mucilage metabolic process involved in seed coat development	IEP	Neighborhood
BP	GO:0048467	gynoecium development	IEP	Neighborhood
BP	GO:0048468	cell development	IEP	Neighborhood
BP	GO:0048519	negative regulation of biological process	IEP	Neighborhood
BP	GO:0048608	reproductive structure development	IEP	Neighborhood
BP	GO:0048768	root hair cell tip growth	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
BP	GO:0048869	cellular developmental process	IEP	Neighborhood
BP	GO:0050665	hydrogen peroxide biosynthetic process	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050994	regulation of lipid catabolic process	IEP	Neighborhood
MF	GO:0051020	GTPase binding	IEP	Neighborhood
BP	GO:0051128	regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051130	positive regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Neighborhood
BP	GO:0051495	positive regulation of cytoskeleton organization	IEP	Neighborhood
BP	GO:0051568	histone H3-K4 methylation	IEP	Neighborhood
BP	GO:0051645	Golgi localization	IEP	Neighborhood
BP	GO:0051646	mitochondrion localization	IEP	Neighborhood
MF	GO:0052742	phosphatidylinositol kinase activity	IEP	Neighborhood
MF	GO:0052866	phosphatidylinositol phosphate phosphatase activity	IEP	Neighborhood
BP	GO:0060151	peroxisome localization	IEP	Neighborhood
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	Neighborhood
BP	GO:0060918	auxin transport	IEP	Neighborhood
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0070085	glycosylation	IEP	Neighborhood
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0070646	protein modification by small protein removal	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Neighborhood
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	Neighborhood
BP	GO:0090066	regulation of anatomical structure size	IEP	Neighborhood
BP	GO:0090306	spindle assembly involved in meiosis	IEP	Neighborhood
BP	GO:0090436	leaf pavement cell development	IEP	Neighborhood
BP	GO:0090567	reproductive shoot system development	IEP	Neighborhood
BP	GO:0097435	supramolecular fiber organization	IEP	Neighborhood
MF	GO:0106019	phosphatidylinositol-4,5-bisphosphate phosphatase activity	IEP	Neighborhood
BP	GO:0110053	regulation of actin filament organization	IEP	Neighborhood
CC	GO:0120038	plasma membrane bounded cell projection part	IEP	Neighborhood
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Neighborhood
BP	GO:1901575	organic substance catabolic process	IEP	Neighborhood
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	Neighborhood
BP	GO:1902905	positive regulation of supramolecular fiber organization	IEP	Neighborhood
BP	GO:1903409	reactive oxygen species biosynthetic process	IEP	Neighborhood
BP	GO:1990064	ground tissue pattern formation	IEP	Neighborhood
BP	GO:2000026	regulation of multicellular organismal development	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000569	HECT_dom	829	1142

External Links

No external refs found!

AT3G53090 (UPL7)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation