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  5. Zm00001e039805_P002

Zm00001e039805_P002


Description : chaperone component ClpC of chloroplast Clp-type protease complex


Gene families : OG0000276 (Archaeplastida) Phylogenetic Tree(s): OG0000276_tree ,
OG_05_0002249 (LandPlants) Phylogenetic Tree(s): OG_05_0002249_tree ,
OG_06_0002384 (SeedPlants) Phylogenetic Tree(s): OG_06_0002384_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039805_P002
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00164160 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.05 Archaeplastida
AMTR_s00065p00179810 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.06 Archaeplastida
AMTR_s00110p00042430 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.06 Archaeplastida
AT5G50920 HSP93-V, DCA1,... CLPC homologue 1 0.05 Archaeplastida
GSVIVT01008636001 No alias External stimuli response.temperature.Hsp... 0.05 Archaeplastida
LOC_Os12g12850.1 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.12 Archaeplastida
MA_8117g0010 No alias ATP-dependent Clp protease ATP-binding subunit ClpA... 0.06 Archaeplastida
Pp3c25_7180V3.1 No alias CLPC homologue 1 0.02 Archaeplastida
Pp3c5_23010V3.1 No alias CLPC homologue 1 0.02 Archaeplastida
Pp3c8_12320V3.1 No alias casein lytic proteinase B3 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006772 thiamine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009228 thiamine biosynthetic process IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042723 thiamine-containing compound metabolic process IEP Neighborhood
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 296 412
IPR003959 ATPase_AAA_core 633 807
IPR019489 Clp_ATPase_C 814 893
IPR004176 Clp_N 181 232
IPR004176 Clp_N 105 157
No external refs found!