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Description : Reticulon family protein
Gene families : OG0000225 (Archaeplastida) Phylogenetic Tree(s): OG0000225_tree ,
OG_05_0000137 (LandPlants) Phylogenetic Tree(s): OG_05_0000137_tree ,
OG_06_0000298 (SeedPlants) Phylogenetic Tree(s): OG_06_0000298_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G61560 | |
| Cluster | HCCA: Cluster_57 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G54120 | No alias | Reticulon family protein | 0.05 | Archaeplastida | |
| Gb_10741 | No alias | ER-associated protein (Reticulon) | 0.02 | Archaeplastida | |
| MA_232678g0010 | No alias | ER-associated protein (Reticulon) | 0.02 | Archaeplastida | |
| Pp3c12_4500V3.1 | No alias | Reticulon family protein | 0.02 | Archaeplastida | |
| Zm00001e026095_P001 | No alias | ER-associated protein (Reticulon) | 0.03 | Archaeplastida | |
| Zm00001e027185_P001 | No alias | ER-associated protein (Reticulon) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005783 | endoplasmic reticulum | ISS | Interproscan |
| CC | GO:0005886 | plasma membrane | IDA | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| CC | GO:0009506 | plasmodesma | IDA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | Neighborhood |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Neighborhood |
| MF | GO:0004749 | ribose phosphate diphosphokinase activity | IEP | Neighborhood |
| MF | GO:0005350 | pyrimidine nucleobase transmembrane transporter activity | IEP | Neighborhood |
| CC | GO:0005768 | endosome | IEP | Neighborhood |
| BP | GO:0006260 | DNA replication | IEP | Neighborhood |
| BP | GO:0006261 | DNA-dependent DNA replication | IEP | Neighborhood |
| BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
| BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | Neighborhood |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Neighborhood |
| MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
| CC | GO:0009330 | DNA topoisomerase complex (ATP-hydrolyzing) | IEP | Neighborhood |
| CC | GO:0009504 | cell plate | IEP | Neighborhood |
| MF | GO:0015205 | nucleobase transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015210 | uracil transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0016778 | diphosphotransferase activity | IEP | Neighborhood |
| BP | GO:0022406 | membrane docking | IEP | Neighborhood |
| BP | GO:0022412 | cellular process involved in reproduction in multicellular organism | IEP | Neighborhood |
| CC | GO:0031410 | cytoplasmic vesicle | IEP | Neighborhood |
| BP | GO:0048235 | pollen sperm cell differentiation | IEP | Neighborhood |
| BP | GO:0048278 | vesicle docking | IEP | Neighborhood |
| MF | GO:0061505 | DNA topoisomerase II activity | IEP | Neighborhood |
| BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
| CC | GO:0097708 | intracellular vesicle | IEP | Neighborhood |
| CC | GO:0099023 | tethering complex | IEP | Neighborhood |
| BP | GO:0140029 | exocytic process | IEP | Neighborhood |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003388 | Reticulon | 69 | 223 |
| No external refs found! |