AT4G00540 (ATMYB3R2, MYB3R-2,...)

Aliases : ATMYB3R2, MYB3R-2, MYB3R2, PC-MYB2

Description : myb domain protein 3r2

Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000288 (LandPlants) Phylogenetic Tree(s): OG_05_0000288_tree ,
OG_06_0024910 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G00540
Cluster	HCCA: Cluster_124

Target	Alias	Description	ECC score	Gene Family Method
AT1G43330	No alias	Homeodomain-like superfamily protein	0.05	Archaeplastida
AT1G63910	MYB103, AtMYB103	myb domain protein 103	0.03	Archaeplastida
AT1G74080	ATMYB122, MYB122	myb domain protein 122	0.03	Archaeplastida
AT2G25230	MYB100, AtMYB100	myb domain protein 100	0.05	Archaeplastida
AT3G28470	ATMYB35, TDF1	Duplicated homeodomain-like superfamily protein	0.04	Archaeplastida
AT4G38620	ATMYB4, MYB4	myb domain protein 4	0.05	Archaeplastida
AT5G16770	MYB9, AtMYB9	myb domain protein 9	0.03	Archaeplastida
GSVIVT01004317001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01010006001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01025269001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01028235001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01035332001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
LOC_Os07g44090.3	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_10190951g0010	No alias	transcription factor (MYB)	0.04	Archaeplastida
MA_10434028g0010	No alias	transcription factor (MYB)	0.04	Archaeplastida
MA_121533g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_7105735g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_8626g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_926162g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
Mp3g07510.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Mp5g22280.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc01g087130.4.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc02g082040.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc02g089190.2.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc03g112890.1.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc03g119050.4.1	No alias	component SNAPC4 of SNAP snRNA transcription factor complex	0.03	Archaeplastida
Solyc04g056310.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc04g074170.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc05g051550.2.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc05g052850.3.1	No alias	transcription factor (MYB)	0.05	Archaeplastida
Solyc07g054840.4.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Solyc08g076700.1.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc08g076710.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc09g008250.4.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Solyc09g090790.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc10g005460.3.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Solyc10g008700.3.1	No alias	No annotation	0.03	Archaeplastida
Solyc11g072060.3.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Solyc12g099140.2.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e016583_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e017428_P003	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e020044_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e027531_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e032298_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e032347_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e034072_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e035652_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e040265_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e040384_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000280	nuclear division	IEP	Neighborhood
BP	GO:0001578	microtubule bundle formation	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003743	translation initiation factor activity	IEP	Neighborhood
MF	GO:0004143	diacylglycerol kinase activity	IEP	Neighborhood
MF	GO:0004712	protein serine/threonine/tyrosine kinase activity	IEP	Neighborhood
CC	GO:0005819	spindle	IEP	Neighborhood
CC	GO:0005828	kinetochore microtubule	IEP	Neighborhood
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Neighborhood
CC	GO:0005874	microtubule	IEP	Neighborhood
CC	GO:0005876	spindle microtubule	IEP	Neighborhood
BP	GO:0006413	translational initiation	IEP	Neighborhood
BP	GO:0006417	regulation of translation	IEP	Neighborhood
BP	GO:0006446	regulation of translational initiation	IEP	Neighborhood
BP	GO:0007051	spindle organization	IEP	Neighborhood
BP	GO:0007186	G-protein coupled receptor signaling pathway	IEP	Neighborhood
BP	GO:0007205	protein kinase C-activating G-protein coupled receptor signaling pathway	IEP	Neighborhood
MF	GO:0008135	translation factor activity, RNA binding	IEP	Neighborhood
CC	GO:0009524	phragmoplast	IEP	Neighborhood
CC	GO:0009574	preprophase band	IEP	Neighborhood
BP	GO:0010389	regulation of G2/M transition of mitotic cell cycle	IEP	Neighborhood
BP	GO:0022403	cell cycle phase	IEP	Neighborhood
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Neighborhood
BP	GO:0044848	biological phase	IEP	Neighborhood
BP	GO:0051225	spindle assembly	IEP	Neighborhood
BP	GO:0051322	anaphase	IEP	Neighborhood
BP	GO:0070925	organelle assembly	IEP	Neighborhood
CC	GO:0099080	supramolecular complex	IEP	Neighborhood
CC	GO:0099081	supramolecular polymer	IEP	Neighborhood
CC	GO:0099512	supramolecular fiber	IEP	Neighborhood
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	Neighborhood
BP	GO:1901987	regulation of cell cycle phase transition	IEP	Neighborhood
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	Neighborhood
BP	GO:1902749	regulation of cell cycle G2/M phase transition	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	156	198

External Links

No external refs found!

AT4G00540 (ATMYB3R2, MYB3R-2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation