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  5. Mp4g21830.1

Mp4g21830.1


Description : RAN GTPase-activating protein 1 OS=Arabidopsis thaliana (sp|q9le82|ragp1_arath : 99.4)


Gene families : OG0007970 (Archaeplastida) Phylogenetic Tree(s): OG0007970_tree ,
OG_05_0008326 (LandPlants) Phylogenetic Tree(s): OG_05_0008326_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g21830.1
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00132040 evm_27.TU.AmTr_v1... RAN GTPase-activating protein 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G10510 emb2004 RNI-like superfamily protein 0.02 Archaeplastida
GSVIVT01020179001 No alias RAN GTPase-activating protein 1 OS=Arabidopsis thaliana 0.09 Archaeplastida
Gb_17994 No alias RAN GTPase-activating protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc05g006170.4.1 No alias RAN GTPase-activating protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e036062_P001 No alias RAN GTPase-activating protein 1 OS=Arabidopsis thaliana... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0002161 aminoacyl-tRNA editing activity IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004814 arginine-tRNA ligase activity IEP Neighborhood
MF GO:0004817 cysteine-tRNA ligase activity IEP Neighborhood
MF GO:0004832 valine-tRNA ligase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006177 GMP biosynthetic process IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006420 arginyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006438 valyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006553 lysine metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009085 lysine biosynthetic process IEP Neighborhood
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009163 nucleoside biosynthetic process IEP Neighborhood
MF GO:0009975 cyclase activity IEP Neighborhood
MF GO:0009976 tocopherol cyclase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0035596 methylthiotransferase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
BP GO:0042451 purine nucleoside biosynthetic process IEP Neighborhood
BP GO:0042455 ribonucleoside biosynthetic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0046037 GMP metabolic process IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046129 purine ribonucleoside biosynthetic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046451 diaminopimelate metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
MF GO:0050497 transferase activity, transferring alkylthio groups IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
BP GO:1901070 guanosine-containing compound biosynthetic process IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
BP GO:1901659 glycosyl compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 251 274
IPR001611 Leu-rich_rpt 399 414
IPR001611 Leu-rich_rpt 449 471
IPR001611 Leu-rich_rpt 223 243
IPR001611 Leu-rich_rpt 336 358
IPR001611 Leu-rich_rpt 534 556
IPR001611 Leu-rich_rpt 504 527
IPR001611 Leu-rich_rpt 480 499
No external refs found!