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  5. AT4G04200

AT4G04200


Description : Microsomal signal peptidase 25 kDa subunit (SPC25)


Gene families : OG0004825 (Archaeplastida) Phylogenetic Tree(s): OG0004825_tree ,
OG_05_0004499 (LandPlants) Phylogenetic Tree(s): OG_05_0004499_tree ,
OG_06_0004600 (SeedPlants) Phylogenetic Tree(s): OG_06_0004600_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G04200
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g35720.1 No alias component SPCs2 of SPC endoplasmic signal peptidase complex 0.04 Archaeplastida
MA_17138g0010 No alias component SPCs2 of SPC endoplasmic signal peptidase complex 0.02 Archaeplastida
Mp1g06520.1 No alias component SPCs2 of SPC endoplasmic signal peptidase complex 0.03 Archaeplastida
Pp3c8_24950V3.1 No alias Microsomal signal peptidase 25 kDa subunit (SPC25) 0.04 Archaeplastida
Zm00001e007990_P001 No alias component SPCs2 of SPC endoplasmic signal peptidase complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000338 protein deneddylation IEP Neighborhood
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
CC GO:0000506 glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0004034 aldose 1-epimerase activity IEP Neighborhood
MF GO:0004306 ethanolamine-phosphate cytidylyltransferase activity IEP Neighborhood
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
MF GO:0005456 CMP-N-acetylneuraminate transmembrane transporter activity IEP Neighborhood
MF GO:0005459 UDP-galactose transmembrane transporter activity IEP Neighborhood
MF GO:0005460 UDP-glucose transmembrane transporter activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0005527 macrolide binding IEP Neighborhood
MF GO:0005528 FK506 binding IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005794 Golgi apparatus IEP Neighborhood
CC GO:0005819 spindle IEP Neighborhood
BP GO:0006012 galactose metabolic process IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006506 GPI anchor biosynthetic process IEP Neighborhood
BP GO:0006566 threonine metabolic process IEP Neighborhood
BP GO:0006567 threonine catabolic process IEP Neighborhood
BP GO:0006570 tyrosine metabolic process IEP Neighborhood
BP GO:0006571 tyrosine biosynthetic process IEP Neighborhood
BP GO:0006646 phosphatidylethanolamine biosynthetic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
CC GO:0008180 COP9 signalosome IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0008514 organic anion transmembrane transporter activity IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009068 aspartate family amino acid catabolic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
BP GO:0009894 regulation of catabolic process IEP Neighborhood
BP GO:0009896 positive regulation of catabolic process IEP Neighborhood
BP GO:0010099 regulation of photomorphogenesis IEP Neighborhood
BP GO:0010100 negative regulation of photomorphogenesis IEP Neighborhood
BP GO:0010219 regulation of vernalization response IEP Neighborhood
BP GO:0010387 COP9 signalosome assembly IEP Neighborhood
MF GO:0010427 abscisic acid binding IEP Neighborhood
BP GO:0010971 positive regulation of G2/M transition of mitotic cell cycle IEP Neighborhood
MF GO:0015136 sialic acid transmembrane transporter activity IEP Neighborhood
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0015739 sialic acid transport IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0015786 UDP-glucose transmembrane transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
CC GO:0015935 small ribosomal subunit IEP Neighborhood
BP GO:0016233 telomere capping IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
MF GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019840 isoprenoid binding IEP Neighborhood
CC GO:0022627 cytosolic small ribosomal subunit IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
BP GO:0030656 regulation of vitamin metabolic process IEP Neighborhood
CC GO:0031306 intrinsic component of mitochondrial outer membrane IEP Neighborhood
CC GO:0031307 integral component of mitochondrial outer membrane IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0032451 demethylase activity IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0032592 integral component of mitochondrial membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0033293 monocarboxylic acid binding IEP Neighborhood
MF GO:0035514 DNA demethylase activity IEP Neighborhood
MF GO:0042162 telomeric DNA binding IEP Neighborhood
BP GO:0042176 regulation of protein catabolic process IEP Neighborhood
MF GO:0042562 hormone binding IEP Neighborhood
MF GO:0043047 single-stranded telomeric DNA binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
MF GO:0043178 alcohol binding IEP Neighborhood
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0045732 positive regulation of protein catabolic process IEP Neighborhood
BP GO:0045787 positive regulation of cell cycle IEP Neighborhood
BP GO:0045931 positive regulation of mitotic cell cycle IEP Neighborhood
BP GO:0046337 phosphatidylethanolamine metabolic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046520 sphingoid biosynthetic process IEP Neighborhood
BP GO:0048441 petal development IEP Neighborhood
BP GO:0048442 sepal development IEP Neighborhood
BP GO:0048468 cell development IEP Neighborhood
BP GO:0048506 regulation of timing of meristematic phase transition IEP Neighborhood
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP Neighborhood
BP GO:0048832 specification of plant organ number IEP Neighborhood
BP GO:0048833 specification of floral organ number IEP Neighborhood
BP GO:0051196 regulation of coenzyme metabolic process IEP Neighborhood
BP GO:0051247 positive regulation of protein metabolic process IEP Neighborhood
MF GO:0070567 cytidylyltransferase activity IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0080147 root hair cell development IEP Neighborhood
BP GO:0090068 positive regulation of cell cycle process IEP Neighborhood
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Neighborhood
CC GO:0098573 intrinsic component of mitochondrial membrane IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
MF GO:0098847 sequence-specific single stranded DNA binding IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1901989 positive regulation of cell cycle phase transition IEP Neighborhood
BP GO:1901992 positive regulation of mitotic cell cycle phase transition IEP Neighborhood
BP GO:1902751 positive regulation of cell cycle G2/M phase transition IEP Neighborhood
BP GO:2000030 regulation of response to red or far red light IEP Neighborhood
BP GO:2000082 regulation of L-ascorbic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR009582 SigPept_cplx_su2 24 177
No external refs found!