AT1G17745 (PGDH)

Aliases : PGDH

Description : D-3-phosphoglycerate dehydrogenase

Gene families : OG0001476 (Archaeplastida) Phylogenetic Tree(s): OG0001476_tree ,
OG_05_0001585 (LandPlants) Phylogenetic Tree(s): OG_05_0001585_tree ,
OG_06_0001865 (SeedPlants) Phylogenetic Tree(s): OG_06_0001865_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G17745
Cluster	HCCA: Cluster_32

Type	GO Term	Name	Evidence	Source
BP	GO:0002682	regulation of immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004617	phosphoglycerate dehydrogenase activity	IGI	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006563	L-serine metabolic process	None	Extended
BP	GO:0006564	L-serine biosynthetic process	TAS	Interproscan
BP	GO:0006568	tryptophan metabolic process	None	Extended
BP	GO:0006569	tryptophan catabolic process	RCA	Interproscan
BP	GO:0006576	cellular biogenic amine metabolic process	None	Extended
BP	GO:0006586	indolalkylamine metabolic process	None	Extended
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	RCA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	cellular amino acid biosynthetic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009063	cellular amino acid catabolic process	None	Extended
BP	GO:0009069	serine family amino acid metabolic process	None	Extended
BP	GO:0009070	serine family amino acid biosynthetic process	None	Extended
BP	GO:0009072	aromatic amino acid family metabolic process	None	Extended
BP	GO:0009074	aromatic amino acid family catabolic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0009310	amine catabolic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009683	indoleacetic acid metabolic process	None	Extended
BP	GO:0009684	indoleacetic acid biosynthetic process	RCA	Interproscan
BP	GO:0009850	auxin metabolic process	None	Extended
BP	GO:0009851	auxin biosynthetic process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009962	regulation of flavonoid biosynthetic process	None	Extended
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010363	regulation of plant-type hypersensitive response	RCA	Interproscan
BP	GO:0010817	regulation of hormone levels	None	Extended
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016054	organic acid catabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019439	aromatic compound catabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0034613	cellular protein localization	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034754	cellular hormone metabolic process	None	Extended
BP	GO:0042402	cellular biogenic amine catabolic process	None	Extended
BP	GO:0042430	indole-containing compound metabolic process	None	Extended
BP	GO:0042435	indole-containing compound biosynthetic process	None	Extended
BP	GO:0042436	indole-containing compound catabolic process	None	Extended
BP	GO:0042445	hormone metabolic process	None	Extended
BP	GO:0042446	hormone biosynthetic process	None	Extended
BP	GO:0042742	defense response to bacterium	RCA	Interproscan
BP	GO:0042886	amide transport	None	Extended
BP	GO:0043067	regulation of programmed cell death	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044106	cellular amine metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044270	cellular nitrogen compound catabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044434	chloroplast part	None	Extended
CC	GO:0044435	plastid part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046218	indolalkylamine catabolic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046395	carboxylic acid catabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046700	heterocycle catabolic process	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051704	multi-organism process	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901361	organic cyclic compound catabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901606	alpha-amino acid catabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
BP	GO:0000303	response to superoxide	IEP	Neighborhood
BP	GO:0000305	response to oxygen radical	IEP	Neighborhood
CC	GO:0000325	plant-type vacuole	IEP	Neighborhood
BP	GO:0000741	karyogamy	IEP	Neighborhood
BP	GO:0001708	cell fate specification	IEP	Neighborhood
BP	GO:0002229	defense response to oomycetes	IEP	Neighborhood
BP	GO:0002239	response to oomycetes	IEP	Neighborhood
MF	GO:0003840	obsolete gamma-glutamyltransferase activity	IEP	Neighborhood
MF	GO:0004177	aminopeptidase activity	IEP	Neighborhood
MF	GO:0004648	O-phospho-L-serine:2-oxoglutarate aminotransferase activity	IEP	Neighborhood
MF	GO:0004737	pyruvate decarboxylase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005310	dicarboxylic acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005432	calcium:sodium antiporter activity	IEP	Neighborhood
CC	GO:0005768	endosome	IEP	Neighborhood
CC	GO:0005773	vacuole	IEP	Neighborhood
CC	GO:0005774	vacuolar membrane	IEP	Neighborhood
CC	GO:0005794	Golgi apparatus	IEP	Neighborhood
CC	GO:0005802	trans-Golgi network	IEP	Neighborhood
BP	GO:0005996	monosaccharide metabolic process	IEP	Neighborhood
BP	GO:0006006	glucose metabolic process	IEP	Neighborhood
BP	GO:0006094	gluconeogenesis	IEP	Neighborhood
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Neighborhood
BP	GO:0006749	glutathione metabolic process	IEP	Neighborhood
BP	GO:0006751	glutathione catabolic process	IEP	Neighborhood
BP	GO:0006805	xenobiotic metabolic process	IEP	Neighborhood
BP	GO:0006814	sodium ion transport	IEP	Neighborhood
BP	GO:0006855	drug transmembrane transport	IEP	Neighborhood
BP	GO:0006970	response to osmotic stress	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
MF	GO:0008483	transaminase activity	IEP	Neighborhood
MF	GO:0008509	anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008517	folic acid transmembrane transporter activity	IEP	Neighborhood
BP	GO:0009608	response to symbiont	IEP	Neighborhood
BP	GO:0009610	response to symbiotic fungus	IEP	Neighborhood
BP	GO:0009611	response to wounding	IEP	Neighborhood
BP	GO:0009624	response to nematode	IEP	Neighborhood
BP	GO:0009627	systemic acquired resistance	IEP	Neighborhood
BP	GO:0009628	response to abiotic stimulus	IEP	Neighborhood
BP	GO:0009651	response to salt stress	IEP	Neighborhood
BP	GO:0009686	gibberellin biosynthetic process	IEP	Neighborhood
BP	GO:0009718	anthocyanin-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0009743	response to carbohydrate	IEP	Neighborhood
BP	GO:0009755	hormone-mediated signaling pathway	IEP	Neighborhood
BP	GO:0009804	coumarin metabolic process	IEP	Neighborhood
BP	GO:0009805	coumarin biosynthetic process	IEP	Neighborhood
BP	GO:0009814	defense response, incompatible interaction	IEP	Neighborhood
BP	GO:0009873	ethylene-activated signaling pathway	IEP	Neighborhood
BP	GO:0009913	epidermal cell differentiation	IEP	Neighborhood
BP	GO:0010035	response to inorganic substance	IEP	Neighborhood
BP	GO:0010118	stomatal movement	IEP	Neighborhood
BP	GO:0010197	polar nucleus fusion	IEP	Neighborhood
BP	GO:0010201	response to continuous far red light stimulus by the high-irradiance response system	IEP	Neighborhood
BP	GO:0010260	animal organ senescence	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015081	sodium ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015085	calcium ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015238	drug transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015297	antiporter activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015368	calcium:cation antiporter activity	IEP	Neighborhood
BP	GO:0015893	drug transport	IEP	Neighborhood
BP	GO:0016102	diterpenoid biosynthetic process	IEP	Neighborhood
MF	GO:0016755	transferase activity, transferring amino-acyl groups	IEP	Neighborhood
MF	GO:0016756	glutathione gamma-glutamylcysteinyltransferase activity	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Neighborhood
BP	GO:0019318	hexose metabolic process	IEP	Neighborhood
BP	GO:0019319	hexose biosynthetic process	IEP	Neighborhood
MF	GO:0019825	oxygen binding	IEP	Neighborhood
MF	GO:0022804	active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030855	epithelial cell differentiation	IEP	Neighborhood
CC	GO:0031090	organelle membrane	IEP	Neighborhood
CC	GO:0031410	cytoplasmic vesicle	IEP	Neighborhood
CC	GO:0031982	vesicle	IEP	Neighborhood
BP	GO:0034635	glutathione transport	IEP	Neighborhood
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	Neighborhood
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Neighborhood
BP	GO:0035725	sodium ion transmembrane transport	IEP	Neighborhood
BP	GO:0042178	xenobiotic catabolic process	IEP	Neighborhood
BP	GO:0042219	cellular modified amino acid catabolic process	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
BP	GO:0042939	tripeptide transport	IEP	Neighborhood
BP	GO:0043171	peptide catabolic process	IEP	Neighborhood
BP	GO:0044273	sulfur compound catabolic process	IEP	Neighborhood
CC	GO:0044431	Golgi apparatus part	IEP	Neighborhood
CC	GO:0044437	vacuolar part	IEP	Neighborhood
BP	GO:0046283	anthocyanin-containing compound metabolic process	IEP	Neighborhood
BP	GO:0046364	monosaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0046482	para-aminobenzoic acid metabolic process	IEP	Neighborhood
MF	GO:0046527	glucosyltransferase activity	IEP	Neighborhood
MF	GO:0046982	protein heterodimerization activity	IEP	Neighborhood
BP	GO:0048284	organelle fusion	IEP	Neighborhood
BP	GO:0048513	animal organ development	IEP	Neighborhood
BP	GO:0051181	cofactor transport	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
BP	GO:0072337	modified amino acid transport	IEP	Neighborhood
BP	GO:0072348	sulfur compound transport	IEP	Neighborhood
MF	GO:0072349	modified amino acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0080018	anthocyanin 5-O-glucosyltransferase activity	IEP	Neighborhood
MF	GO:0090482	vitamin transmembrane transporter activity	IEP	Neighborhood
CC	GO:0097708	intracellular vesicle	IEP	Neighborhood
CC	GO:0098588	bounding membrane of organelle	IEP	Neighborhood
CC	GO:0098791	Golgi subcompartment	IEP	Neighborhood
CC	GO:0098805	whole membrane	IEP	Neighborhood
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006140	D-isomer_DH_NAD-bd	187	362
IPR002912	ACT_dom	553	610
IPR006139	D-isomer_2_OHA_DH_cat_dom	85	394

External Links

No external refs found!

AT1G17745 (PGDH)

Expression Profile

Co-expression Networks

Functional Annotation