AT4G13240 (ATROPGEF9, ROPGEF9)

Aliases : ATROPGEF9, ROPGEF9

Description : RHO guanyl-nucleotide exchange factor 9

Gene families : OG0000251 (Archaeplastida) Phylogenetic Tree(s): OG0000251_tree ,
OG_05_0001518 (LandPlants) Phylogenetic Tree(s): OG_05_0001518_tree ,
OG_06_0000896 (SeedPlants) Phylogenetic Tree(s): OG_06_0000896_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G13240
Cluster	HCCA: Cluster_96

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00109p00064220	evm_27.TU.AmTr_v1...	Multi-process regulation.Rop GTPase regulatory...	0.12	Archaeplastida
AT2G45890	ATROPGEF4, RHS11, ROPGEF4	RHO guanyl-nucleotide exchange factor 4	0.04	Archaeplastida
AT5G19560	ATROPGEF10, ROPGEF10	ROP uanine nucleotide exchange factor 10	0.03	Archaeplastida
GSVIVT01015369001	No alias	Multi-process regulation.Rop GTPase regulatory...	0.1	Archaeplastida
GSVIVT01017070001	No alias	Multi-process regulation.Rop GTPase regulatory...	0.1	Archaeplastida
Gb_24552	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.03	Archaeplastida
LOC_Os01g48410.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.1	Archaeplastida
LOC_Os01g55520.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.09	Archaeplastida
LOC_Os02g17240.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.05	Archaeplastida
LOC_Os05g38000.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.04	Archaeplastida
LOC_Os05g48640.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.06	Archaeplastida
LOC_Os10g40270.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.03	Archaeplastida
Solyc03g120650.4.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.13	Archaeplastida
Solyc07g032730.4.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.03	Archaeplastida
Solyc12g007150.3.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.02	Archaeplastida
Solyc12g044270.2.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.14	Archaeplastida
Zm00001e014205_P002	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.11	Archaeplastida
Zm00001e015569_P002	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.02	Archaeplastida
Zm00001e019750_P001	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.12	Archaeplastida
Zm00001e020182_P002	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.07	Archaeplastida
Zm00001e024760_P001	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.09	Archaeplastida
Zm00001e026517_P004	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.11	Archaeplastida
Zm00001e034952_P003	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0001558	regulation of cell growth	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005085	guanyl-nucleotide exchange factor activity	None	Extended
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	None	Extended
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009827	plant-type cell wall modification	RCA	Interproscan
BP	GO:0009860	pollen tube growth	RCA	Interproscan
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010048	vernalization response	RCA	Interproscan
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
MF	GO:0017016	Ras GTPase binding	None	Extended
MF	GO:0017048	Rho GTPase binding	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0022604	regulation of cell morphogenesis	None	Extended
MF	GO:0031267	small GTPase binding	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032989	cellular component morphogenesis	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043900	regulation of multi-organism process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0045595	regulation of cell differentiation	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048868	pollen tube development	RCA	Interproscan
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0051020	GTPase binding	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051510	regulation of unidimensional cell growth	None	Extended
BP	GO:0060284	regulation of cell development	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080092	regulation of pollen tube growth	IGI	Interproscan
MF	GO:0098772	molecular function regulator	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0001882	nucleoside binding	IEP	Neighborhood
MF	GO:0001883	purine nucleoside binding	IEP	Neighborhood
BP	GO:0002238	response to molecule of fungal origin	IEP	Neighborhood
MF	GO:0003774	motor activity	IEP	Neighborhood
MF	GO:0003777	microtubule motor activity	IEP	Neighborhood
MF	GO:0004143	diacylglycerol kinase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Neighborhood
MF	GO:0004683	calmodulin-dependent protein kinase activity	IEP	Neighborhood
MF	GO:0005200	structural constituent of cytoskeleton	IEP	Neighborhood
MF	GO:0005451	monovalent cation:proton antiporter activity	IEP	Neighborhood
MF	GO:0005484	SNAP receptor activity	IEP	Neighborhood
MF	GO:0005525	GTP binding	IEP	Neighborhood
CC	GO:0005834	heterotrimeric G-protein complex	IEP	Neighborhood
CC	GO:0005856	cytoskeleton	IEP	Neighborhood
CC	GO:0005886	plasma membrane	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006814	sodium ion transport	IEP	Neighborhood
BP	GO:0006828	manganese ion transport	IEP	Neighborhood
BP	GO:0006875	cellular metal ion homeostasis	IEP	Neighborhood
BP	GO:0006885	regulation of pH	IEP	Neighborhood
BP	GO:0006928	movement of cell or subcellular component	IEP	Neighborhood
BP	GO:0007010	cytoskeleton organization	IEP	Neighborhood
BP	GO:0007186	G-protein coupled receptor signaling pathway	IEP	Neighborhood
BP	GO:0007205	protein kinase C-activating G-protein coupled receptor signaling pathway	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015081	sodium ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015298	solute:cation antiporter activity	IEP	Neighborhood
MF	GO:0015299	solute:proton antiporter activity	IEP	Neighborhood
MF	GO:0015385	sodium:proton antiporter activity	IEP	Neighborhood
MF	GO:0015491	cation:cation antiporter activity	IEP	Neighborhood
CC	GO:0015629	actin cytoskeleton	IEP	Neighborhood
BP	GO:0015691	cadmium ion transport	IEP	Neighborhood
MF	GO:0016175	superoxide-generating NADPH oxidase activity	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
CC	GO:0016324	apical plasma membrane	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
BP	GO:0017157	regulation of exocytosis	IEP	Neighborhood
MF	GO:0019001	guanyl nucleotide binding	IEP	Neighborhood
BP	GO:0030029	actin filament-based process	IEP	Neighborhood
BP	GO:0030036	actin cytoskeleton organization	IEP	Neighborhood
BP	GO:0030048	actin filament-based movement	IEP	Neighborhood
CC	GO:0030427	site of polarized growth	IEP	Neighborhood
BP	GO:0030834	regulation of actin filament depolymerization	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
MF	GO:0032549	ribonucleoside binding	IEP	Neighborhood
MF	GO:0032550	purine ribonucleoside binding	IEP	Neighborhood
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0032794	GTPase activating protein binding	IEP	Neighborhood
BP	GO:0034220	ion transmembrane transport	IEP	Neighborhood
BP	GO:0035725	sodium ion transmembrane transport	IEP	Neighborhood
CC	GO:0035838	growing cell tip	IEP	Neighborhood
BP	GO:0043244	regulation of protein complex disassembly	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
CC	GO:0044459	plasma membrane part	IEP	Neighborhood
CC	GO:0044463	cell projection part	IEP	Neighborhood
CC	GO:0045177	apical part of cell	IEP	Neighborhood
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0046910	pectinesterase inhibitor activity	IEP	Neighborhood
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Neighborhood
BP	GO:0050801	ion homeostasis	IEP	Neighborhood
BP	GO:0051017	actin filament bundle assembly	IEP	Neighborhood
BP	GO:0051046	regulation of secretion	IEP	Neighborhood
CC	GO:0051286	cell tip	IEP	Neighborhood
BP	GO:0051648	vesicle localization	IEP	Neighborhood
BP	GO:0051650	establishment of vesicle localization	IEP	Neighborhood
BP	GO:0055080	cation homeostasis	IEP	Neighborhood
BP	GO:0060627	regulation of vesicle-mediated transport	IEP	Neighborhood
BP	GO:0061572	actin filament bundle organization	IEP	Neighborhood
BP	GO:0080147	root hair cell development	IEP	Neighborhood
CC	GO:0090404	pollen tube tip	IEP	Neighborhood
CC	GO:0098590	plasma membrane region	IEP	Neighborhood
BP	GO:0098655	cation transmembrane transport	IEP	Neighborhood
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Neighborhood
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Neighborhood
BP	GO:0098771	inorganic ion homeostasis	IEP	Neighborhood
CC	GO:0098797	plasma membrane protein complex	IEP	Neighborhood
MF	GO:0099516	ion antiporter activity	IEP	Neighborhood
CC	GO:0120038	plasma membrane bounded cell projection part	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
BP	GO:1901879	regulation of protein depolymerization	IEP	Neighborhood
BP	GO:1903530	regulation of secretion by cell	IEP	Neighborhood
CC	GO:1905360	GTPase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005512	PRONE_dom	73	423

External Links

No external refs found!

AT4G13240 (ATROPGEF9, ROPGEF9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation