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  5. Mp8g13470.1

Mp8g13470.1


Description : transcription factor (BBX-CO)


Gene families : OG0000859 (Archaeplastida) Phylogenetic Tree(s): OG0000859_tree ,
OG_05_0001138 (LandPlants) Phylogenetic Tree(s): OG_05_0001138_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g13470.1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00262710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00019p00192190 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AT2G24790 COL3, ATCOL3 CONSTANS-like 3 0.03 Archaeplastida
AT3G02380 COL2, ATCOL2 CONSTANS-like 2 0.04 Archaeplastida
AT5G15850 COL1, ATCOL1 CONSTANS-like 1 0.05 Archaeplastida
AT5G24930 ATCOL4, COL4 CONSTANS-like 4 0.03 Archaeplastida
GSVIVT01029107001 No alias Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01036037001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
GSVIVT01036499001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
LOC_Os02g39710.1 No alias transcription factor (BBX-CO) 0.03 Archaeplastida
LOC_Os06g44450.1 No alias Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis... 0.02 Archaeplastida
MA_7292g0010 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
Pp3c2_31580V3.1 No alias CONSTANS-like 4 0.04 Archaeplastida
Solyc07g006630.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e002319_P001 No alias Transcription factor GHD7 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e007691_P001 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
Zm00001e037873_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019566 arabinose metabolic process IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0046373 L-arabinose metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000315 Znf_B-box 44 90
IPR000315 Znf_B-box 3 44
IPR010402 CCT_domain 336 378
No external refs found!