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  5. Mp8g18780.1

Mp8g18780.1


Description : ubiquitin-binding adaptor (UFD3)


Gene families : OG0005853 (Archaeplastida) Phylogenetic Tree(s): OG0005853_tree ,
OG_05_0008208 (LandPlants) Phylogenetic Tree(s): OG_05_0008208_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g18780.1
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00150840 evm_27.TU.AmTr_v1... COMPASS-like H3K4 histone methylase component WDR5A... 0.04 Archaeplastida
Cre09.g389912 No alias Dynein assembly factor with WDR repeat domains 1... 0.02 Archaeplastida
GSVIVT01031913001 No alias Dynein assembly factor with WDR repeat domains 1... 0.02 Archaeplastida
Solyc01g109350.3.1 No alias ubiquitin-binding adaptor (UFD3) 0.02 Archaeplastida
Zm00001e032747_P004 No alias ubiquitin-binding adaptor (UFD3) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP Neighborhood
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004057 arginyltransferase activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Neighborhood
MF GO:0004814 arginine-tRNA ligase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
CC GO:0005885 Arp2/3 protein complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006338 chromatin remodeling IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006420 arginyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006476 protein deacetylation IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0007015 actin filament organization IEP Neighborhood
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
MF GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009143 nucleoside triphosphate catabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009891 positive regulation of biosynthetic process IEP Neighborhood
BP GO:0009893 positive regulation of metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010628 positive regulation of gene expression IEP Neighborhood
BP GO:0010638 positive regulation of organelle organization IEP Neighborhood
CC GO:0015629 actin cytoskeleton IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016575 histone deacetylation IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
BP GO:0016598 protein arginylation IEP Neighborhood
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
CC GO:0017119 Golgi transport complex IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
BP GO:0030838 positive regulation of actin filament polymerization IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031325 positive regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031334 positive regulation of protein complex assembly IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032273 positive regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Neighborhood
BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034243 regulation of transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0035601 protein deacylation IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044089 positive regulation of cellular component biogenesis IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045010 actin nucleation IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051254 positive regulation of RNA metabolic process IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051495 positive regulation of cytoskeleton organization IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0097435 supramolecular fiber organization IEP Neighborhood
BP GO:0098732 macromolecule deacylation IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013535 PUL_dom 495 757
IPR015155 PFU 339 449
IPR001680 WD40_repeat 180 215
IPR001680 WD40_repeat 140 177
IPR001680 WD40_repeat 221 256
IPR001680 WD40_repeat 258 293
IPR001680 WD40_repeat 13 44
IPR001680 WD40_repeat 104 137
No external refs found!