AT4G14770 (TCX2, ATTCX2)

Aliases : TCX2, ATTCX2

Description : TESMIN/TSO1-like CXC 2

Gene families : OG0000498 (Archaeplastida) Phylogenetic Tree(s): OG0000498_tree ,
OG_05_0001037 (LandPlants) Phylogenetic Tree(s): OG_05_0001037_tree ,
OG_06_0001586 (SeedPlants) Phylogenetic Tree(s): OG_06_0001586_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G14770
Cluster	HCCA: Cluster_31

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01017242001	No alias	RNA biosynthesis.transcriptional activation.CPP1-like...	0.03	Archaeplastida
GSVIVT01018021001	No alias	RNA biosynthesis.transcriptional activation.CPP1-like...	0.04	Archaeplastida
GSVIVT01035818001	No alias	RNA biosynthesis.transcriptional activation.CPP1-like...	0.03	Archaeplastida
LOC_Os03g43730.1	No alias	CPP1-like transcription factor	0.07	Archaeplastida
MA_15033g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_33846g0010	No alias	CPP1-like transcription factor	0.03	Archaeplastida
MA_44980g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Smo443191	No alias	RNA biosynthesis.transcriptional activation.CPP1-like...	0.04	Archaeplastida
Zm00001e019745_P001	No alias	CPP1-like transcription factor	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	None	Extended
BP	GO:0006261	DNA-dependent DNA replication	RCA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010075	regulation of meristem growth	RCA	Interproscan
BP	GO:0010103	stomatal complex morphogenesis	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042127	regulation of cell proliferation	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048509	regulation of meristem development	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090626	plant epidermis morphogenesis	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	IEP	Neighborhood
CC	GO:0000228	nuclear chromosome	IEP	Neighborhood
CC	GO:0000793	condensed chromosome	IEP	Neighborhood
CC	GO:0000794	condensed nuclear chromosome	IEP	Neighborhood
BP	GO:0000911	cytokinesis by cell plate formation	IEP	Neighborhood
BP	GO:0003006	developmental process involved in reproduction	IEP	Neighborhood
MF	GO:0004015	adenosylmethionine-8-amino-7-oxononanoate transaminase activity	IEP	Neighborhood
MF	GO:0004141	dethiobiotin synthase activity	IEP	Neighborhood
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005372	water transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
CC	GO:0005694	chromosome	IEP	Neighborhood
CC	GO:0005737	cytoplasm	IEP	Neighborhood
BP	GO:0006270	DNA replication initiation	IEP	Neighborhood
BP	GO:0006275	regulation of DNA replication	IEP	Neighborhood
BP	GO:0006304	DNA modification	IEP	Neighborhood
BP	GO:0006305	DNA alkylation	IEP	Neighborhood
BP	GO:0006306	DNA methylation	IEP	Neighborhood
BP	GO:0006325	chromatin organization	IEP	Neighborhood
BP	GO:0006333	chromatin assembly or disassembly	IEP	Neighborhood
BP	GO:0006338	chromatin remodeling	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006479	protein methylation	IEP	Neighborhood
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Neighborhood
BP	GO:0006768	biotin metabolic process	IEP	Neighborhood
BP	GO:0006996	organelle organization	IEP	Neighborhood
BP	GO:0007010	cytoskeleton organization	IEP	Neighborhood
BP	GO:0007017	microtubule-based process	IEP	Neighborhood
BP	GO:0007166	cell surface receptor signaling pathway	IEP	Neighborhood
BP	GO:0007167	enzyme linked receptor protein signaling pathway	IEP	Neighborhood
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	Neighborhood
BP	GO:0007346	regulation of mitotic cell cycle	IEP	Neighborhood
BP	GO:0007349	cellularization	IEP	Neighborhood
BP	GO:0008213	protein alkylation	IEP	Neighborhood
BP	GO:0008283	cell proliferation	IEP	Neighborhood
MF	GO:0008805	carbon-monoxide oxygenase activity	IEP	Neighborhood
BP	GO:0009102	biotin biosynthetic process	IEP	Neighborhood
BP	GO:0009558	embryo sac cellularization	IEP	Neighborhood
BP	GO:0010389	regulation of G2/M transition of mitotic cell cycle	IEP	Neighborhood
BP	GO:0010564	regulation of cell cycle process	IEP	Neighborhood
BP	GO:0010583	response to cyclopentenone	IEP	Neighborhood
MF	GO:0015250	water channel activity	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
BP	GO:0016458	gene silencing	IEP	Neighborhood
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	Neighborhood
BP	GO:0016569	covalent chromatin modification	IEP	Neighborhood
BP	GO:0016570	histone modification	IEP	Neighborhood
BP	GO:0016571	histone methylation	IEP	Neighborhood
BP	GO:0016572	histone phosphorylation	IEP	Neighborhood
MF	GO:0016622	oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor	IEP	Neighborhood
MF	GO:0016882	cyclo-ligase activity	IEP	Neighborhood
MF	GO:0017016	Ras GTPase binding	IEP	Neighborhood
MF	GO:0017048	Rho GTPase binding	IEP	Neighborhood
BP	GO:0018022	peptidyl-lysine methylation	IEP	Neighborhood
BP	GO:0018193	peptidyl-amino acid modification	IEP	Neighborhood
BP	GO:0018205	peptidyl-lysine modification	IEP	Neighborhood
MF	GO:0019207	kinase regulator activity	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0019887	protein kinase regulator activity	IEP	Neighborhood
MF	GO:0019899	enzyme binding	IEP	Neighborhood
BP	GO:0022402	cell cycle process	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
CC	GO:0030427	site of polarized growth	IEP	Neighborhood
MF	GO:0031267	small GTPase binding	IEP	Neighborhood
BP	GO:0031497	chromatin assembly	IEP	Neighborhood
BP	GO:0031507	heterochromatin assembly	IEP	Neighborhood
BP	GO:0032259	methylation	IEP	Neighborhood
BP	GO:0032506	cytokinetic process	IEP	Neighborhood
CC	GO:0033597	mitotic checkpoint complex	IEP	Neighborhood
BP	GO:0034968	histone lysine methylation	IEP	Neighborhood
CC	GO:0035838	growing cell tip	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0043414	macromolecule methylation	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
CC	GO:0044459	plasma membrane part	IEP	Neighborhood
CC	GO:0044463	cell projection part	IEP	Neighborhood
BP	GO:0044728	DNA methylation or demethylation	IEP	Neighborhood
BP	GO:0045787	positive regulation of cell cycle	IEP	Neighborhood
BP	GO:0048449	floral organ formation	IEP	Neighborhood
BP	GO:0048451	petal formation	IEP	Neighborhood
BP	GO:0048453	sepal formation	IEP	Neighborhood
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	Neighborhood
MF	GO:0051020	GTPase binding	IEP	Neighborhood
BP	GO:0051052	regulation of DNA metabolic process	IEP	Neighborhood
CC	GO:0051286	cell tip	IEP	Neighborhood
BP	GO:0051567	histone H3-K9 methylation	IEP	Neighborhood
BP	GO:0051726	regulation of cell cycle	IEP	Neighborhood
BP	GO:0061647	histone H3-K9 modification	IEP	Neighborhood
BP	GO:0070828	heterochromatin organization	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood
CC	GO:0090404	pollen tube tip	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood
CC	GO:0120038	plasma membrane bounded cell projection part	IEP	Neighborhood
BP	GO:1901987	regulation of cell cycle phase transition	IEP	Neighborhood
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	Neighborhood
BP	GO:1902410	mitotic cytokinetic process	IEP	Neighborhood
BP	GO:1902749	regulation of cell cycle G2/M phase transition	IEP	Neighborhood
BP	GO:1903047	mitotic cell cycle process	IEP	Neighborhood
BP	GO:1905393	plant organ formation	IEP	Neighborhood
BP	GO:2000012	regulation of auxin polar transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005172	CRC	460	496
IPR005172	CRC	375	410

External Links

No external refs found!

AT4G14770 (TCX2, ATTCX2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation