AT4G18390 (TCP2)

Aliases : TCP2

Description : TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2

Gene families : OG0000332 (Archaeplastida) Phylogenetic Tree(s): OG0000332_tree ,
OG_05_0000167 (LandPlants) Phylogenetic Tree(s): OG_05_0000167_tree ,
OG_06_0000105 (SeedPlants) Phylogenetic Tree(s): OG_06_0000105_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G18390
Cluster	HCCA: Cluster_214

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01011962001	No alias	RNA biosynthesis.transcriptional activation.TCP...	0.05	Archaeplastida
Gb_07891	No alias	transcription factor (TCP)	0.08	Archaeplastida
LOC_Os01g11550.1	No alias	transcription factor (TCP)	0.04	Archaeplastida
Zm00001e011516_P001	No alias	transcription factor (TCP)	0.03	Archaeplastida
Zm00001e032122_P001	No alias	transcription factor (TCP)	0.04	Archaeplastida
Zm00001e032821_P001	No alias	transcription factor (TCP)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0006417	regulation of translation	RCA	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009657	plastid organization	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009965	leaf morphogenesis	IGI	Interproscan
BP	GO:0009965	leaf morphogenesis	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010608	posttranscriptional regulation of gene expression	None	Extended
BP	GO:0010628	positive regulation of gene expression	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0030154	cell differentiation	IGI	Interproscan
BP	GO:0030154	cell differentiation	RCA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0032268	regulation of cellular protein metabolic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034248	regulation of cellular amide metabolic process	None	Extended
BP	GO:0040034	regulation of development, heterochronic	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045893	positive regulation of transcription, DNA-templated	RCA	Interproscan
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0045962	positive regulation of development, heterochronic	IGI	Interproscan
BP	GO:0048366	leaf development	IMP	Interproscan
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0099402	plant organ development	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000023	maltose metabolic process	IEP	Neighborhood
BP	GO:0000165	MAPK cascade	IEP	Neighborhood
BP	GO:0000255	allantoin metabolic process	IEP	Neighborhood
BP	GO:0000256	allantoin catabolic process	IEP	Neighborhood
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0001871	pattern binding	IEP	Neighborhood
BP	GO:0002682	regulation of immune system process	IEP	Neighborhood
MF	GO:0003774	motor activity	IEP	Neighborhood
MF	GO:0003777	microtubule motor activity	IEP	Neighborhood
MF	GO:0004133	glycogen debranching enzyme activity	IEP	Neighborhood
MF	GO:0004556	alpha-amylase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0005976	polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0005982	starch metabolic process	IEP	Neighborhood
BP	GO:0005984	disaccharide metabolic process	IEP	Neighborhood
BP	GO:0006073	cellular glucan metabolic process	IEP	Neighborhood
BP	GO:0006144	purine nucleobase metabolic process	IEP	Neighborhood
BP	GO:0006145	purine nucleobase catabolic process	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006612	protein targeting to membrane	IEP	Neighborhood
BP	GO:0006790	sulfur compound metabolic process	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
BP	GO:0008285	negative regulation of cell proliferation	IEP	Neighborhood
BP	GO:0009112	nucleobase metabolic process	IEP	Neighborhood
BP	GO:0009250	glucan biosynthetic process	IEP	Neighborhood
BP	GO:0009311	oligosaccharide metabolic process	IEP	Neighborhood
BP	GO:0009617	response to bacterium	IEP	Neighborhood
BP	GO:0009668	plastid membrane organization	IEP	Neighborhood
BP	GO:0009755	hormone-mediated signaling pathway	IEP	Neighborhood
BP	GO:0009790	embryo development	IEP	Neighborhood
BP	GO:0009793	embryo development ending in seed dormancy	IEP	Neighborhood
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009863	salicylic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009908	flower development	IEP	Neighborhood
BP	GO:0010021	amylopectin biosynthetic process	IEP	Neighborhood
BP	GO:0010027	thylakoid membrane organization	IEP	Neighborhood
BP	GO:0010135	ureide metabolic process	IEP	Neighborhood
BP	GO:0010136	ureide catabolic process	IEP	Neighborhood
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	Neighborhood
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	IEP	Neighborhood
BP	GO:0010363	regulation of plant-type hypersensitive response	IEP	Neighborhood
CC	GO:0010368	chloroplast isoamylase complex	IEP	Neighborhood
BP	GO:0010941	regulation of cell death	IEP	Neighborhood
MF	GO:0015562	efflux transmembrane transporter activity	IEP	Neighborhood
MF	GO:0016160	amylase activity	IEP	Neighborhood
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Neighborhood
MF	GO:0016813	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines	IEP	Neighborhood
MF	GO:0019156	isoamylase activity	IEP	Neighborhood
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Neighborhood
BP	GO:0019252	starch biosynthetic process	IEP	Neighborhood
BP	GO:0023014	signal transduction by protein phosphorylation	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Neighborhood
BP	GO:0031347	regulation of defense response	IEP	Neighborhood
BP	GO:0031348	negative regulation of defense response	IEP	Neighborhood
BP	GO:0031399	regulation of protein modification process	IEP	Neighborhood
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Neighborhood
BP	GO:0035303	regulation of dephosphorylation	IEP	Neighborhood
BP	GO:0035304	regulation of protein dephosphorylation	IEP	Neighborhood
BP	GO:0035556	intracellular signal transduction	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
CC	GO:0043033	isoamylase complex	IEP	Neighborhood
BP	GO:0043067	regulation of programmed cell death	IEP	Neighborhood
BP	GO:0043085	positive regulation of catalytic activity	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043605	cellular amide catabolic process	IEP	Neighborhood
BP	GO:0044042	glucan metabolic process	IEP	Neighborhood
BP	GO:0044093	positive regulation of molecular function	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0045088	regulation of innate immune response	IEP	Neighborhood
BP	GO:0046113	nucleobase catabolic process	IEP	Neighborhood
BP	GO:0048481	plant ovule development	IEP	Neighborhood
BP	GO:0048585	negative regulation of response to stimulus	IEP	Neighborhood
BP	GO:0050776	regulation of immune response	IEP	Neighborhood
BP	GO:0050790	regulation of catalytic activity	IEP	Neighborhood
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Neighborhood
BP	GO:0051193	regulation of cofactor metabolic process	IEP	Neighborhood
BP	GO:0061024	membrane organization	IEP	Neighborhood
BP	GO:0065009	regulation of molecular function	IEP	Neighborhood
MF	GO:0071522	ureidoglycine aminohydrolase activity	IEP	Neighborhood
BP	GO:0072523	purine-containing compound catabolic process	IEP	Neighborhood
BP	GO:0072657	protein localization to membrane	IEP	Neighborhood
BP	GO:0080134	regulation of response to stress	IEP	Neighborhood
BP	GO:0080135	regulation of cellular response to stress	IEP	Neighborhood
BP	GO:0090150	establishment of protein localization to membrane	IEP	Neighborhood
BP	GO:2000377	regulation of reactive oxygen species metabolic process	IEP	Neighborhood
BP	GO:2000896	amylopectin metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR017887	TF_TCP_subgr	41	171

External Links

No external refs found!

AT4G18390 (TCP2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation