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  5. Pp3c19_20260V3.1

Pp3c19_20260V3.1


Description : 26S proteasome regulatory subunit S2 1A


Gene families : OG0003431 (Archaeplastida) Phylogenetic Tree(s): OG0003431_tree ,
OG_05_0004013 (LandPlants) Phylogenetic Tree(s): OG_05_0004013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c19_20260V3.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00242820 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.regulatory... 0.06 Archaeplastida
AT2G20580 RPN1A, ATRPN1A 26S proteasome regulatory subunit S2 1A 0.1 Archaeplastida
AT4G28470 RPN1B, ATRPN1B 26S proteasome regulatory subunit S2 1B 0.07 Archaeplastida
Cpa|evm.model.tig00020703.10 No alias Protein degradation.26S proteasome.regulatory... 0.01 Archaeplastida
Cre16.g676197 No alias Protein degradation.26S proteasome.regulatory... 0.04 Archaeplastida
GSVIVT01020602001 No alias Protein degradation.26S proteasome.regulatory... 0.07 Archaeplastida
Gb_05383 No alias regulatory component RPN1 of 26S proteasome 0.06 Archaeplastida
LOC_Os02g05340.1 No alias regulatory component RPN1 of 26S proteasome 0.05 Archaeplastida
MA_42234g0010 No alias 26S proteasome non-ATPase regulatory subunit 2 homolog A... 0.03 Archaeplastida
MA_6189g0010 No alias regulatory component RPN1 of 26S proteasome 0.03 Archaeplastida
Mp5g07110.1 No alias regulatory component RPN1 of 26S proteasome 0.07 Archaeplastida
Pp3c18_12670V3.1 No alias 26S proteasome regulatory subunit S2 1A 0.03 Archaeplastida
Smo228162 No alias Protein degradation.26S proteasome.regulatory... 0.04 Archaeplastida
Solyc07g053650.4.1 No alias regulatory component RPN1 of 26S proteasome 0.05 Archaeplastida
Zm00001e013651_P001 No alias regulatory component RPN1 of 26S proteasome 0.06 Archaeplastida
Zm00001e025223_P001 No alias regulatory component RPN1 of 26S proteasome 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
MF GO:0004619 phosphoglycerate mutase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006007 glucose catabolic process IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019320 hexose catabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046365 monosaccharide catabolic process IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!