AT4G24960 (HVA22D, ATHVA22D)

Aliases : HVA22D, ATHVA22D

Description : HVA22 homologue D

Gene families : OG0000830 (Archaeplastida) Phylogenetic Tree(s): OG0000830_tree ,
OG_05_0000552 (LandPlants) Phylogenetic Tree(s): OG_05_0000552_tree ,
OG_06_0003333 (SeedPlants) Phylogenetic Tree(s): OG_06_0003333_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G24960
Cluster	HCCA: Cluster_168

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01000808001	No alias	HVA22-like protein f OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01008576001	No alias	HVA22-like protein e OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01020012001	No alias	HVA22-like protein a OS=Arabidopsis thaliana	0.03	Archaeplastida
Gb_24347	No alias	HVA22-like protein f OS=Arabidopsis thaliana...	0.02	Archaeplastida
Pp3c4_23200V3.1	No alias	HVA22-like protein F	0.02	Archaeplastida
Solyc05g007300.3.1	No alias	HVA22-like protein c OS=Arabidopsis thaliana...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006972	hyperosmotic response	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009269	response to desiccation	RCA	Interproscan
BP	GO:0009409	response to cold	IEP	Interproscan
BP	GO:0009409	response to cold	RCA	Interproscan
BP	GO:0009414	response to water deprivation	IEP	Interproscan
BP	GO:0009414	response to water deprivation	RCA	Interproscan
BP	GO:0009415	response to water	None	Extended
BP	GO:0009555	pollen development	IMP	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	RCA	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IEP	Interproscan
BP	GO:0009737	response to abscisic acid	RCA	Interproscan
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009894	regulation of catabolic process	None	Extended
BP	GO:0009895	negative regulation of catabolic process	None	Extended
BP	GO:0009908	flower development	IMP	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010506	regulation of autophagy	None	Extended
BP	GO:0010507	negative regulation of autophagy	IMP	Interproscan
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031329	regulation of cellular catabolic process	None	Extended
BP	GO:0031330	negative regulation of cellular catabolic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042538	hyperosmotic salinity response	IEP	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048229	gametophyte development	None	Extended
BP	GO:0048367	shoot system development	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048731	system development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0090567	reproductive shoot system development	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001882	nucleoside binding	IEP	Neighborhood
MF	GO:0001883	purine nucleoside binding	IEP	Neighborhood
BP	GO:0003002	regionalization	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004435	phosphatidylinositol phospholipase C activity	IEP	Neighborhood
MF	GO:0004629	phospholipase C activity	IEP	Neighborhood
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEP	Neighborhood
MF	GO:0005432	calcium:sodium antiporter activity	IEP	Neighborhood
MF	GO:0005525	GTP binding	IEP	Neighborhood
CC	GO:0005783	endoplasmic reticulum	IEP	Neighborhood
CC	GO:0005829	cytosol	IEP	Neighborhood
CC	GO:0005886	plasma membrane	IEP	Neighborhood
CC	GO:0005911	cell-cell junction	IEP	Neighborhood
CC	GO:0005971	ribonucleoside-diphosphate reductase complex	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0007029	endoplasmic reticulum organization	IEP	Neighborhood
BP	GO:0009186	deoxyribonucleoside diphosphate metabolic process	IEP	Neighborhood
CC	GO:0009506	plasmodesma	IEP	Neighborhood
BP	GO:0009739	response to gibberellin	IEP	Neighborhood
BP	GO:0009799	specification of symmetry	IEP	Neighborhood
BP	GO:0009820	alkaloid metabolic process	IEP	Neighborhood
BP	GO:0009821	alkaloid biosynthetic process	IEP	Neighborhood
BP	GO:0009855	determination of bilateral symmetry	IEP	Neighborhood
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	Neighborhood
BP	GO:0009956	radial pattern formation	IEP	Neighborhood
BP	GO:0010014	meristem initiation	IEP	Neighborhood
BP	GO:0010080	regulation of floral meristem growth	IEP	Neighborhood
BP	GO:0010286	heat acclimation	IEP	Neighborhood
BP	GO:0010492	maintenance of shoot apical meristem identity	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
MF	GO:0015368	calcium:cation antiporter activity	IEP	Neighborhood
CC	GO:0015629	actin cytoskeleton	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Neighborhood
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	IEP	Neighborhood
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Neighborhood
MF	GO:0016843	amine-lyase activity	IEP	Neighborhood
MF	GO:0016844	strictosidine synthase activity	IEP	Neighborhood
MF	GO:0017040	N-acylsphingosine amidohydrolase activity	IEP	Neighborhood
MF	GO:0019001	guanyl nucleotide binding	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
CC	GO:0030054	cell junction	IEP	Neighborhood
CC	GO:0030176	integral component of endoplasmic reticulum membrane	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0031227	intrinsic component of endoplasmic reticulum membrane	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
MF	GO:0032549	ribonucleoside binding	IEP	Neighborhood
MF	GO:0032550	purine ribonucleoside binding	IEP	Neighborhood
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0035265	organ growth	IEP	Neighborhood
BP	GO:0048580	regulation of post-embryonic development	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0060771	phyllotactic patterning	IEP	Neighborhood
BP	GO:0060772	leaf phyllotactic patterning	IEP	Neighborhood
BP	GO:0060774	auxin mediated signaling pathway involved in phyllotactic patterning	IEP	Neighborhood
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	IEP	Neighborhood
BP	GO:0065001	specification of axis polarity	IEP	Neighborhood
CC	GO:0071458	integral component of cytoplasmic side of endoplasmic reticulum membrane	IEP	Neighborhood
CC	GO:0071782	endoplasmic reticulum tubular network	IEP	Neighborhood
BP	GO:0071786	endoplasmic reticulum tubular network organization	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
CC	GO:0098827	endoplasmic reticulum subcompartment	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004345	TB2_DP1_HVA22	24	99

External Links

No external refs found!

AT4G24960 (HVA22D, ATHVA22D)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation