AT4G25000 (AMY1, ATAMY1)

Aliases : AMY1, ATAMY1

Description : alpha-amylase-like

Gene families : OG0000584 (Archaeplastida) Phylogenetic Tree(s): OG0000584_tree ,
OG_05_0001382 (LandPlants) Phylogenetic Tree(s): OG_05_0001382_tree ,
OG_06_0002339 (SeedPlants) Phylogenetic Tree(s): OG_06_0002339_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G25000
Cluster	HCCA: Cluster_20

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00183740	evm_27.TU.AmTr_v1...	Carbohydrate metabolism.starch...	0.04	Archaeplastida
AMTR_s00010p00102390	evm_27.TU.AmTr_v1...	Carbohydrate metabolism.starch...	0.03	Archaeplastida
LOC_Os02g52710.1	No alias	alpha amylase	0.02	Archaeplastida
LOC_Os06g49970.2	No alias	alpha amylase	0.03	Archaeplastida
LOC_Os09g28420.1	No alias	alpha amylase	0.03	Archaeplastida
MA_217935g0010	No alias	alpha amylase	0.02	Archaeplastida
MA_30833g0020	No alias	alpha amylase	0.02	Archaeplastida
MA_336273g0010	No alias	alpha amylase	0.02	Archaeplastida
MA_8527195g0010	No alias	Alpha-amylase 3, chloroplastic OS=Arabidopsis thaliana...	0.02	Archaeplastida
Solyc03g095710.4.1	No alias	alpha amylase	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004556	alpha-amylase activity	IMP	Interproscan
MF	GO:0004556	alpha-amylase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
CC	GO:0005576	extracellular region	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IEP	Interproscan
BP	GO:0009739	response to gibberellin	IEP	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0048046	apoplast	IDA	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000064	L-ornithine transmembrane transporter activity	IEP	Neighborhood
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Neighborhood
BP	GO:0000082	G1/S transition of mitotic cell cycle	IEP	Neighborhood
BP	GO:0000162	tryptophan biosynthetic process	IEP	Neighborhood
MF	GO:0000257	nitrilase activity	IEP	Neighborhood
MF	GO:0003995	acyl-CoA dehydrogenase activity	IEP	Neighborhood
MF	GO:0004022	alcohol dehydrogenase (NAD) activity	IEP	Neighborhood
MF	GO:0004033	aldo-keto reductase (NADP) activity	IEP	Neighborhood
MF	GO:0004222	metalloendopeptidase activity	IEP	Neighborhood
MF	GO:0004439	phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	IEP	Neighborhood
MF	GO:0004834	tryptophan synthase activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0004860	protein kinase inhibitor activity	IEP	Neighborhood
MF	GO:0004861	cyclin-dependent protein serine/threonine kinase inhibitor activity	IEP	Neighborhood
MF	GO:0004867	serine-type endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0005290	L-histidine transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005432	calcium:sodium antiporter activity	IEP	Neighborhood
MF	GO:0005476	carnitine:acyl carnitine antiporter activity	IEP	Neighborhood
BP	GO:0006520	cellular amino acid metabolic process	IEP	Neighborhood
BP	GO:0006560	proline metabolic process	IEP	Neighborhood
BP	GO:0006561	proline biosynthetic process	IEP	Neighborhood
BP	GO:0006775	fat-soluble vitamin metabolic process	IEP	Neighborhood
BP	GO:0006829	zinc ion transport	IEP	Neighborhood
BP	GO:0007568	aging	IEP	Neighborhood
MF	GO:0008106	alcohol dehydrogenase (NADP+) activity	IEP	Neighborhood
MF	GO:0008324	cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008422	beta-glucosidase activity	IEP	Neighborhood
MF	GO:0008429	phosphatidylethanolamine binding	IEP	Neighborhood
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Neighborhood
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009414	response to water deprivation	IEP	Neighborhood
BP	GO:0009415	response to water	IEP	Neighborhood
BP	GO:0009607	response to biotic stimulus	IEP	Neighborhood
BP	GO:0009830	cell wall modification involved in abscission	IEP	Neighborhood
BP	GO:0009915	phloem sucrose loading	IEP	Neighborhood
BP	GO:0010015	root morphogenesis	IEP	Neighborhood
BP	GO:0010101	post-embryonic root morphogenesis	IEP	Neighborhood
BP	GO:0010102	lateral root morphogenesis	IEP	Neighborhood
MF	GO:0010176	homogentisate phytyltransferase activity	IEP	Neighborhood
BP	GO:0010189	vitamin E biosynthetic process	IEP	Neighborhood
BP	GO:0010232	vascular transport	IEP	Neighborhood
BP	GO:0010233	phloem transport	IEP	Neighborhood
BP	GO:0010260	animal organ senescence	IEP	Neighborhood
MF	GO:0010354	homogentisate prenyltransferase activity	IEP	Neighborhood
MF	GO:0015173	aromatic amino acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015174	basic amino acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015179	L-amino acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015181	arginine transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015189	L-lysine transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015297	antiporter activity	IEP	Neighborhood
MF	GO:0015368	calcium:cation antiporter activity	IEP	Neighborhood
BP	GO:0015693	magnesium ion transport	IEP	Neighborhood
BP	GO:0015766	disaccharide transport	IEP	Neighborhood
BP	GO:0015770	sucrose transport	IEP	Neighborhood
BP	GO:0015772	oligosaccharide transport	IEP	Neighborhood
MF	GO:0015926	glucosidase activity	IEP	Neighborhood
BP	GO:0015994	chlorophyll metabolic process	IEP	Neighborhood
MF	GO:0016229	steroid dehydrogenase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Neighborhood
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Neighborhood
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0016815	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016836	hydro-lyase activity	IEP	Neighborhood
MF	GO:0018822	nitrile hydratase activity	IEP	Neighborhood
MF	GO:0019210	kinase inhibitor activity	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
MF	GO:0030291	protein serine/threonine kinase inhibitor activity	IEP	Neighborhood
BP	GO:0031407	oxylipin metabolic process	IEP	Neighborhood
BP	GO:0031408	oxylipin biosynthetic process	IEP	Neighborhood
BP	GO:0032502	developmental process	IEP	Neighborhood
MF	GO:0034485	phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	IEP	Neighborhood
MF	GO:0034593	phosphatidylinositol bisphosphate phosphatase activity	IEP	Neighborhood
MF	GO:0034594	phosphatidylinositol trisphosphate phosphatase activity	IEP	Neighborhood
MF	GO:0034595	phosphatidylinositol phosphate 5-phosphatase activity	IEP	Neighborhood
BP	GO:0042360	vitamin E metabolic process	IEP	Neighborhood
BP	GO:0042362	fat-soluble vitamin biosynthetic process	IEP	Neighborhood
BP	GO:0042430	indole-containing compound metabolic process	IEP	Neighborhood
BP	GO:0042435	indole-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0042737	drug catabolic process	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
BP	GO:0043207	response to external biotic stimulus	IEP	Neighborhood
MF	GO:0043813	phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity	IEP	Neighborhood
BP	GO:0044277	cell wall disassembly	IEP	Neighborhood
BP	GO:0044770	cell cycle phase transition	IEP	Neighborhood
BP	GO:0044772	mitotic cell cycle phase transition	IEP	Neighborhood
BP	GO:0044843	cell cycle G1/S phase transition	IEP	Neighborhood
BP	GO:0045490	pectin catabolic process	IEP	Neighborhood
BP	GO:0045736	negative regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Neighborhood
BP	GO:0045740	positive regulation of DNA replication	IEP	Neighborhood
BP	GO:0046219	indolalkylamine biosynthetic process	IEP	Neighborhood
BP	GO:0046839	phospholipid dephosphorylation	IEP	Neighborhood
BP	GO:0046856	phosphatidylinositol dephosphorylation	IEP	Neighborhood
MF	GO:0046910	pectinesterase inhibitor activity	IEP	Neighborhood
MF	GO:0047782	coniferin beta-glucosidase activity	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0050661	NADP binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
BP	GO:0050829	defense response to Gram-negative bacterium	IEP	Neighborhood
BP	GO:0051054	positive regulation of DNA metabolic process	IEP	Neighborhood
BP	GO:0051094	positive regulation of developmental process	IEP	Neighborhood
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	Neighborhood
BP	GO:0051704	multi-organism process	IEP	Neighborhood
BP	GO:0051707	response to other organism	IEP	Neighborhood
MF	GO:0052866	phosphatidylinositol phosphate phosphatase activity	IEP	Neighborhood
MF	GO:0070401	NADP+ binding	IEP	Neighborhood
MF	GO:0080061	indole-3-acetonitrile nitrilase activity	IEP	Neighborhood
MF	GO:0080109	indole-3-acetonitrile nitrile hydratase activity	IEP	Neighborhood
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood
MF	GO:0106018	phosphatidylinositol-3,5-bisphosphate phosphatase activity	IEP	Neighborhood
MF	GO:0106019	phosphatidylinositol-4,5-bisphosphate phosphatase activity	IEP	Neighborhood
BP	GO:1900055	regulation of leaf senescence	IEP	Neighborhood
BP	GO:1900057	positive regulation of leaf senescence	IEP	Neighborhood
MF	GO:1901474	azole transmembrane transporter activity	IEP	Neighborhood
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	Neighborhood
BP	GO:1904030	negative regulation of cyclin-dependent protein kinase activity	IEP	Neighborhood
BP	GO:1905392	plant organ morphogenesis	IEP	Neighborhood
BP	GO:1905623	positive regulation of leaf development	IEP	Neighborhood
BP	GO:2000024	regulation of leaf development	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR012850	A-amylase_bs_C	363	421
IPR006047	Glyco_hydro_13_cat_dom	50	342

External Links

No external refs found!

AT4G25000 (AMY1, ATAMY1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation