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  5. AT4G33220

AT4G33220 (PME44, ATPME44)


Aliases : PME44, ATPME44

Description : pectin methylesterase 44


Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0000014 (SeedPlants) Phylogenetic Tree(s): OG_06_0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G33220
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00239700 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00007p00101250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
AMTR_s00021p00242180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.09 Archaeplastida
AMTR_s00129p00031200 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.07 Archaeplastida
AMTR_s00129p00033080 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AT2G43050 ATPMEPCRD Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT2G45220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT3G10710 RHS12 root hair specific 12 0.03 Archaeplastida
AT5G04960 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT5G49180 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
GSVIVT01015000001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01016667001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01026518001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.07 Archaeplastida
GSVIVT01028264001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01037344001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Gb_01422 No alias pectin methylesterase 0.06 Archaeplastida
Gb_06354 No alias pectin methylesterase 0.04 Archaeplastida
Gb_10522 No alias pectin methylesterase 0.02 Archaeplastida
Gb_10523 No alias pectin methylesterase 0.02 Archaeplastida
Gb_18512 No alias pectin methylesterase 0.03 Archaeplastida
Gb_25439 No alias pectin methylesterase 0.03 Archaeplastida
Gb_35881 No alias pectin methylesterase 0.03 Archaeplastida
Gb_36012 No alias pectin methylesterase 0.06 Archaeplastida
LOC_Os01g21034.1 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os01g65790.1 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os02g54190.1 No alias pectin methylesterase 0.06 Archaeplastida
LOC_Os06g09340.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os07g47830.1 No alias pectin methylesterase 0.06 Archaeplastida
LOC_Os11g07090.1 No alias pectin methylesterase 0.03 Archaeplastida
MA_133919g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_177599g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_18093g0010 No alias Pectinesterase 2.1 OS=Solanum lycopersicum... 0.02 Archaeplastida
MA_26888g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_96515g0010 No alias pectin methylesterase 0.02 Archaeplastida
Pp3c15_12280V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
Pp3c17_6440V3.1 No alias pectin methylesterase PCR fragment F 0.06 Archaeplastida
Pp3c21_11740V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 Archaeplastida
Pp3c26_2170V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c2_35260V3.1 No alias pectin methylesterase 3 0.04 Archaeplastida
Pp3c4_22420V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c8_3840V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Smo114014 No alias Cell wall.pectin.homogalacturonan.modification and... 0.07 Archaeplastida
Smo420760 No alias Cell wall.pectin.homogalacturonan.modification and... 0.09 Archaeplastida
Smo89509 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Solyc01g091050.4.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc02g014300.2.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc02g080220.3.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc02g081990.3.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc03g083840.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc03g083870.4.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc06g034360.2.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc07g064190.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc09g075350.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e011069_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e014142_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e017514_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e017515_P001 No alias pectin methylesterase 0.09 Archaeplastida
Zm00001e022184_P001 No alias pectin methylesterase 0.06 Archaeplastida
Zm00001e026790_P001 No alias pectin methylesterase 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0009505 plant-type cell wall ISS Interproscan
MF GO:0030599 pectinesterase activity ISS Interproscan
BP GO:0050829 defense response to Gram-negative bacterium IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP Neighborhood
BP GO:0000902 cell morphogenesis IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004028 3-chloroallyl aldehyde dehydrogenase activity IEP Neighborhood
MF GO:0004029 aldehyde dehydrogenase (NAD) activity IEP Neighborhood
MF GO:0004165 dodecenoyl-CoA delta-isomerase activity IEP Neighborhood
MF GO:0004312 fatty acid synthase activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0006949 syncytium formation IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008361 regulation of cell size IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0008809 carnitine racemase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009409 response to cold IEP Neighborhood
BP GO:0009411 response to UV IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009637 response to blue light IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
BP GO:0009737 response to abscisic acid IEP Neighborhood
BP GO:0009825 multidimensional cell growth IEP Neighborhood
BP GO:0009826 unidimensional cell growth IEP Neighborhood
BP GO:0009827 plant-type cell wall modification IEP Neighborhood
BP GO:0009828 plant-type cell wall loosening IEP Neighborhood
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP Neighborhood
CC GO:0009897 external side of plasma membrane IEP Neighborhood
BP GO:0009913 epidermal cell differentiation IEP Neighborhood
BP GO:0009914 hormone transport IEP Neighborhood
MF GO:0009922 fatty acid elongase activity IEP Neighborhood
BP GO:0009926 auxin polar transport IEP Neighborhood
BP GO:0009932 cell tip growth IEP Neighborhood
BP GO:0009959 negative gravitropism IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010015 root morphogenesis IEP Neighborhood
BP GO:0010025 wax biosynthetic process IEP Neighborhood
BP GO:0010075 regulation of meristem growth IEP Neighborhood
BP GO:0010115 regulation of abscisic acid biosynthetic process IEP Neighborhood
BP GO:0010143 cutin biosynthetic process IEP Neighborhood
BP GO:0010155 regulation of proton transport IEP Neighborhood
BP GO:0010166 wax metabolic process IEP Neighborhood
BP GO:0010222 stem vascular tissue pattern formation IEP Neighborhood
BP GO:0010315 auxin efflux IEP Neighborhood
BP GO:0010345 suberin biosynthetic process IEP Neighborhood
BP GO:0010540 basipetal auxin transport IEP Neighborhood
BP GO:0010541 acropetal auxin transport IEP Neighborhood
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Neighborhood
BP GO:0010928 regulation of auxin mediated signaling pathway IEP Neighborhood
MF GO:0015245 fatty acid transmembrane transporter activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0015718 monocarboxylic acid transport IEP Neighborhood
BP GO:0015908 fatty acid transport IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
BP GO:0016143 S-glycoside metabolic process IEP Neighborhood
BP GO:0016144 S-glycoside biosynthetic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives IEP Neighborhood
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0018685 alkane 1-monooxygenase activity IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0019216 regulation of lipid metabolic process IEP Neighborhood
BP GO:0019747 regulation of isoprenoid metabolic process IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0019757 glycosinolate metabolic process IEP Neighborhood
BP GO:0019758 glycosinolate biosynthetic process IEP Neighborhood
BP GO:0019760 glucosinolate metabolic process IEP Neighborhood
BP GO:0019761 glucosinolate biosynthetic process IEP Neighborhood
BP GO:0019953 sexual reproduction IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030855 epithelial cell differentiation IEP Neighborhood
BP GO:0031407 oxylipin metabolic process IEP Neighborhood
BP GO:0031408 oxylipin biosynthetic process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0032879 regulation of localization IEP Neighborhood
BP GO:0032989 cellular component morphogenesis IEP Neighborhood
BP GO:0034762 regulation of transmembrane transport IEP Neighborhood
BP GO:0034765 regulation of ion transmembrane transport IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0042335 cuticle development IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
BP GO:0042631 cellular response to water deprivation IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0042761 very long-chain fatty acid biosynthetic process IEP Neighborhood
BP GO:0043269 regulation of ion transport IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043455 regulation of secondary metabolic process IEP Neighborhood
BP GO:0043473 pigmentation IEP Neighborhood
BP GO:0043476 pigment accumulation IEP Neighborhood
BP GO:0043478 pigment accumulation in response to UV light IEP Neighborhood
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043480 pigment accumulation in tissues IEP Neighborhood
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044550 secondary metabolite biosynthetic process IEP Neighborhood
BP GO:0044703 multi-organism reproductive process IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046471 phosphatidylglycerol metabolic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
MF GO:0046577 long-chain-alcohol oxidase activity IEP Neighborhood
BP GO:0046890 regulation of lipid biosynthetic process IEP Neighborhood
BP GO:0048437 floral organ development IEP Neighborhood
BP GO:0048509 regulation of meristem development IEP Neighborhood
BP GO:0048588 developmental cell growth IEP Neighborhood
BP GO:0048589 developmental growth IEP Neighborhood
BP GO:0048767 root hair elongation IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0051049 regulation of transport IEP Neighborhood
BP GO:0060560 developmental growth involved in morphogenesis IEP Neighborhood
BP GO:0060918 auxin transport IEP Neighborhood
BP GO:0070887 cellular response to chemical stimulus IEP Neighborhood
BP GO:0071214 cellular response to abiotic stimulus IEP Neighborhood
BP GO:0071229 cellular response to acid chemical IEP Neighborhood
BP GO:0071462 cellular response to water stimulus IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080051 cutin transport IEP Neighborhood
BP GO:0080167 response to karrikin IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0090407 organophosphate biosynthetic process IEP Neighborhood
MF GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity IEP Neighborhood
BP GO:0097305 response to alcohol IEP Neighborhood
CC GO:0098552 side of membrane IEP Neighborhood
BP GO:0104004 cellular response to environmental stimulus IEP Neighborhood
BP GO:1901568 fatty acid derivative metabolic process IEP Neighborhood
BP GO:1901570 fatty acid derivative biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:1901659 glycosyl compound biosynthetic process IEP Neighborhood
BP GO:1901701 cellular response to oxygen-containing compound IEP Neighborhood
BP GO:1902930 regulation of alcohol biosynthetic process IEP Neighborhood
BP GO:1904062 regulation of cation transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 44 142
IPR000070 Pectinesterase_cat 212 509
No external refs found!