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  5. Pp3c2_5990V3.1

Pp3c2_5990V3.1


Description : AP2/B3-like transcriptional factor family protein


Gene families : OG0000741 (Archaeplastida) Phylogenetic Tree(s): OG0000741_tree ,
OG_05_0001199 (LandPlants) Phylogenetic Tree(s): OG_05_0001199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_5990V3.1
Cluster HCCA: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00151100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
AMTR_s00078p00115450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
AT5G42700 No alias AP2/B3-like transcriptional factor family protein 0.02 Archaeplastida
AT5G58280 No alias AP2/B3-like transcriptional factor family protein 0.03 Archaeplastida
GSVIVT01009519001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
GSVIVT01024536001 No alias RNA biosynthesis.transcriptional activation.B3... 0.01 Archaeplastida
GSVIVT01031761001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
Gb_07025 No alias transcription factor (REM) 0.04 Archaeplastida
LOC_Os05g40280.1 No alias transcription factor (REM) 0.02 Archaeplastida
Mp2g08790.1 No alias transcription factor (REM) 0.03 Archaeplastida
Pp3c14_19410V3.1 No alias AP2/B3-like transcriptional factor family protein 0.03 Archaeplastida
Pp3c17_16150V3.1 No alias AP2/B3-like transcriptional factor family protein 0.03 Archaeplastida
Smo424732 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
Solyc04g079130.2.1 No alias transcription factor (REM) 0.03 Archaeplastida
Solyc06g007530.2.1 No alias transcription factor (REM) 0.03 Archaeplastida
Zm00001e000624_P003 No alias transcription factor (REM) 0.05 Archaeplastida
Zm00001e031956_P001 No alias transcription factor (REM) 0.02 Archaeplastida
Zm00001e040028_P004 No alias transcription factor (REM) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000444 MIS12/MIND type complex IEP Neighborhood
CC GO:0000818 nuclear MIS12/MIND complex IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0010639 negative regulation of organelle organization IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0033044 regulation of chromosome organization IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
CC GO:0042555 MCM complex IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051095 regulation of helicase activity IEP Neighborhood
BP GO:0051097 negative regulation of helicase activity IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051129 negative regulation of cellular component organization IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
BP GO:0051346 negative regulation of hydrolase activity IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:1905462 regulation of DNA duplex unwinding IEP Neighborhood
BP GO:1905463 negative regulation of DNA duplex unwinding IEP Neighborhood
BP GO:1905774 regulation of DNA helicase activity IEP Neighborhood
BP GO:1905775 negative regulation of DNA helicase activity IEP Neighborhood
BP GO:2001251 negative regulation of chromosome organization IEP Neighborhood
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 130 219
No external refs found!