AT4G34850 (LAP5)

Aliases : LAP5

Description : Chalcone and stilbene synthase family protein

Gene families : OG0005376 (Archaeplastida) Phylogenetic Tree(s): OG0005376_tree ,
OG_05_0003653 (LandPlants) Phylogenetic Tree(s): OG_05_0003653_tree ,
OG_06_0003565 (SeedPlants) Phylogenetic Tree(s): OG_06_0003565_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G34850
Cluster	HCCA: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00111p00033190	evm_27.TU.AmTr_v1...	Cell wall.sporopollenin.synthesis.hydroxyalkyl...	0.12	Archaeplastida
AMTR_s00182p00053650	evm_27.TU.AmTr_v1...	Cell wall.sporopollenin.synthesis.hydroxyalkyl...	0.11	Archaeplastida
GSVIVT01018219001	No alias	Cell wall.sporopollenin.synthesis.hydroxyalkyl...	0.11	Archaeplastida
GSVIVT01024107001	No alias	Type III polyketide synthase B OS=Arabidopsis thaliana	0.11	Archaeplastida
Gb_02579	No alias	hydroxyalkyl alpha-pyrone synthase	0.09	Archaeplastida
Gb_29977	No alias	hydroxyalkyl alpha-pyrone synthase	0.06	Archaeplastida
LOC_Os07g22850.1	No alias	hydroxyalkyl alpha-pyrone synthase	0.09	Archaeplastida
LOC_Os10g34360.1	No alias	hydroxyalkyl alpha-pyrone synthase	0.13	Archaeplastida
MA_4931944g0010	No alias	Type III polyketide synthase A OS=Arabidopsis thaliana...	0.04	Archaeplastida
MA_619670g0010	No alias	Type III polyketide synthase B OS=Arabidopsis thaliana...	0.04	Archaeplastida
Pp3c2_32960V3.1	No alias	Chalcone and stilbene synthase family protein	0.06	Archaeplastida
Smo122361	No alias	Cell wall.sporopollenin.synthesis.hydroxyalkyl...	0.04	Archaeplastida
Solyc01g090600.4.1	No alias	Type III polyketide synthase A OS=Arabidopsis thaliana...	0.19	Archaeplastida
Solyc01g111070.3.1	No alias	hydroxyalkyl alpha-pyrone synthase	0.16	Archaeplastida
Zm00001e004538_P001	No alias	hydroxyalkyl alpha-pyrone synthase	0.15	Archaeplastida
Zm00001e012647_P001	No alias	hydroxyalkyl alpha-pyrone synthase	0.11	Archaeplastida
Zm00001e033354_P001	No alias	hydroxyalkyl alpha-pyrone synthase	0.08	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005783	endoplasmic reticulum	IDA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009698	phenylpropanoid metabolic process	None	Extended
BP	GO:0009699	phenylpropanoid biosynthetic process	ISS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010208	pollen wall assembly	None	Extended
BP	GO:0010584	pollen exine formation	IMP	Interproscan
BP	GO:0010584	pollen exine formation	RCA	Interproscan
BP	GO:0010927	cellular component assembly involved in morphogenesis	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	transferase activity, transferring acyl groups	None	Extended
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030638	polyketide metabolic process	None	Extended
BP	GO:0030639	polyketide biosynthetic process	IDA	Interproscan
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0044550	secondary metabolite biosynthetic process	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080110	sporopollenin biosynthetic process	IMP	Interproscan
MF	GO:0090439	tetraketide alpha-pyrone synthase activity	IDA	Interproscan
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004467	long-chain fatty acid-CoA ligase activity	IEP	Neighborhood
MF	GO:0004497	monooxygenase activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005788	endoplasmic reticulum lumen	IEP	Neighborhood
BP	GO:0006476	protein deacetylation	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Neighborhood
BP	GO:0006863	purine nucleobase transport	IEP	Neighborhood
BP	GO:0007275	multicellular organism development	IEP	Neighborhood
BP	GO:0009555	pollen development	IEP	Neighborhood
BP	GO:0009556	microsporogenesis	IEP	Neighborhood
BP	GO:0009820	alkaloid metabolic process	IEP	Neighborhood
BP	GO:0009821	alkaloid biosynthetic process	IEP	Neighborhood
BP	GO:0010152	pollen maturation	IEP	Neighborhood
BP	GO:0010199	organ boundary specification between lateral organs and the meristem	IEP	Neighborhood
MF	GO:0015271	outward rectifier potassium channel activity	IEP	Neighborhood
MF	GO:0015645	fatty acid ligase activity	IEP	Neighborhood
BP	GO:0015851	nucleobase transport	IEP	Neighborhood
MF	GO:0016207	4-coumarate-CoA ligase activity	IEP	Neighborhood
BP	GO:0016575	histone deacetylation	IEP	Neighborhood
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016621	cinnamoyl-CoA reductase activity	IEP	Neighborhood
MF	GO:0016713	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016843	amine-lyase activity	IEP	Neighborhood
MF	GO:0016844	strictosidine synthase activity	IEP	Neighborhood
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Neighborhood
MF	GO:0018685	alkane 1-monooxygenase activity	IEP	Neighborhood
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Neighborhood
MF	GO:0031956	medium-chain fatty acid-CoA ligase activity	IEP	Neighborhood
BP	GO:0034293	sexual sporulation	IEP	Neighborhood
BP	GO:0035337	fatty-acyl-CoA metabolic process	IEP	Neighborhood
BP	GO:0035384	thioester biosynthetic process	IEP	Neighborhood
BP	GO:0035445	borate transmembrane transport	IEP	Neighborhood
BP	GO:0035601	protein deacylation	IEP	Neighborhood
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Neighborhood
BP	GO:0043934	sporulation	IEP	Neighborhood
BP	GO:0046713	borate transport	IEP	Neighborhood
MF	GO:0046715	active borate transmembrane transporter activity	IEP	Neighborhood
BP	GO:0046949	fatty-acyl-CoA biosynthetic process	IEP	Neighborhood
BP	GO:0048229	gametophyte development	IEP	Neighborhood
BP	GO:0048236	plant-type sporogenesis	IEP	Neighborhood
BP	GO:0048577	negative regulation of short-day photoperiodism, flowering	IEP	Neighborhood
BP	GO:0048587	regulation of short-day photoperiodism, flowering	IEP	Neighborhood
BP	GO:0048658	anther wall tapetum development	IEP	Neighborhood
BP	GO:0048859	formation of anatomical boundary	IEP	Neighborhood
BP	GO:0051321	meiotic cell cycle	IEP	Neighborhood
BP	GO:0051791	medium-chain fatty acid metabolic process	IEP	Neighborhood
BP	GO:0051792	medium-chain fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0071616	acyl-CoA biosynthetic process	IEP	Neighborhood
MF	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity	IEP	Neighborhood
BP	GO:0090691	formation of plant organ boundary	IEP	Neighborhood
BP	GO:0098661	inorganic anion transmembrane transport	IEP	Neighborhood
BP	GO:0098732	macromolecule deacylation	IEP	Neighborhood
BP	GO:1900150	regulation of defense response to fungus	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR012328	Chalcone/stilbene_synth_C	240	389
IPR001099	Chalcone/stilbene_synthase_N	12	230

External Links

No external refs found!

AT4G34850 (LAP5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation