AT5G03510

Description : C2H2-type zinc finger family protein

Gene families : OG0000103 (Archaeplastida) Phylogenetic Tree(s): OG0000103_tree ,
OG_05_0000039 (LandPlants) Phylogenetic Tree(s): OG_05_0000039_tree ,
OG_06_0000107 (SeedPlants) Phylogenetic Tree(s): OG_06_0000107_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G03510
Cluster	HCCA: Cluster_212

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00102p00073930	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.05	Archaeplastida
AT1G27730	ZAT10, STZ	salt tolerance zinc finger	0.03	Archaeplastida
AT2G28710	No alias	C2H2-type zinc finger family protein	0.06	Archaeplastida
AT3G19580	AZF2, ZF2	zinc-finger protein 2	0.04	Archaeplastida
AT3G46080	No alias	C2H2-type zinc finger family protein	0.05	Archaeplastida
AT3G60580	No alias	C2H2-like zinc finger protein	0.07	Archaeplastida
AT5G43170	AZF3, ZF3	zinc-finger protein 3	0.05	Archaeplastida
GSVIVT01031461001	No alias	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.03	Archaeplastida
Gb_16414	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Gb_40151	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
LOC_Os01g62190.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
LOC_Os02g44120.1	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
LOC_Os03g41390.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
LOC_Os03g55540.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
LOC_Os03g60540.1	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
LOC_Os03g60560.1	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
LOC_Os03g60570.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
LOC_Os08g20580.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
LOC_Os10g40660.1	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
MA_109421g0010	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
MA_19127g0010	No alias	C2H2 zinc finger transcription factor	0.05	Archaeplastida
MA_30401g0010	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
MA_5277601g0010	No alias	no hits & (original description: none)	0.07	Archaeplastida
MA_602g0010	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
MA_93487g0010	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Solyc01g107170.2.1	No alias	C2H2 zinc finger transcription factor	0.06	Archaeplastida
Solyc02g088670.1.1	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
Solyc06g060740.3.1	No alias	C2H2 zinc finger transcription factor	0.12	Archaeplastida
Solyc06g075775.1.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Solyc09g008440.1.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e001253_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e002063_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e003057_P001	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
Zm00001e005777_P001	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
Zm00001e006181_P001	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
Zm00001e006184_P001	No alias	C2H2 zinc finger transcription factor	0.05	Archaeplastida
Zm00001e011756_P001	No alias	C2H2 zinc finger transcription factor	0.05	Archaeplastida
Zm00001e011983_P001	No alias	C2H2 zinc finger transcription factor	0.06	Archaeplastida
Zm00001e019350_P001	No alias	C2H2 zinc finger transcription factor	0.06	Archaeplastida
Zm00001e023172_P001	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
Zm00001e028782_P001	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
Zm00001e029605_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e038072_P001	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
Zm00001e038074_P001	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0005996	monosaccharide metabolic process	IEP	Neighborhood
BP	GO:0006084	acetyl-CoA metabolic process	IEP	Neighborhood
BP	GO:0006732	coenzyme metabolic process	IEP	Neighborhood
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Neighborhood
MF	GO:0008446	GDP-mannose 4,6-dehydratase activity	IEP	Neighborhood
BP	GO:0009110	vitamin biosynthetic process	IEP	Neighborhood
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	Neighborhood
BP	GO:0009226	nucleotide-sugar biosynthetic process	IEP	Neighborhood
BP	GO:0009408	response to heat	IEP	Neighborhood
BP	GO:0009608	response to symbiont	IEP	Neighborhood
BP	GO:0009610	response to symbiotic fungus	IEP	Neighborhood
MF	GO:0016836	hydro-lyase activity	IEP	Neighborhood
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Neighborhood
BP	GO:0019852	L-ascorbic acid metabolic process	IEP	Neighborhood
BP	GO:0019853	L-ascorbic acid biosynthetic process	IEP	Neighborhood
BP	GO:0042350	GDP-L-fucose biosynthetic process	IEP	Neighborhood
BP	GO:0042351	'de novo' GDP-L-fucose biosynthetic process	IEP	Neighborhood
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Neighborhood
BP	GO:0046368	GDP-L-fucose metabolic process	IEP	Neighborhood
MF	GO:0050105	L-gulonolactone oxidase activity	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!

AT5G03510

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation